Salmonella enterica TY1512 |
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Putative Salmonella enterica TY1512 RM systems
Ref: Peng,J. and Qian,H. unpublished
REBASE ref # 38180
Complete sequence: 4,829,444 bp
GenBank #: CP141594
REBASE acronym: Sen1512
Org_num: 74282
All begin U9J36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6800 | restriction endonuclease | |||
| 6805 | R | Sen5706IP (100% identity) | GCANNNNNNNNTTTG | Sen1512ORF6810P |
| 6810 | M | M.Sen5706I (100% identity) | GCANNNNNNNNTTTG | M.Sen1512ORF6810P |
| 6815 | S | S.Sen5706I (100% identity) | GCANNNNNNNNTTTG | S.Sen1512ORF6810P |
| 6820 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12580 | cell division protein DamX | |||
| 12585 | M | M.StyTDamP (100% identity) | GATC | M.Sen1512DamP |
| 12590 | ribulose-phosphate 3-epimerase | |||
| 13075 | DUF2556 family protein | |||
| 13080 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen1512ORF13080P |
| 13085 | DNA-binding transcriptional regulator Fis | |||
| 16305 | TraR/DksA family transcriptional regulator | |||
| 16310 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen1512ORF16310P |
| 16315 | replication endonuclease | |||
| 19945 | phosphohydrolase | |||
| 19950 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen1512DcmP |
| 19955 | V | V.Sen8261DcmP (94% identity) | V.Sen1512DcmP | |
| 19960 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4130 | MFS transporter | |||
| 4135 | M | M.SenS709ORF23205P (100% identity) | CAGAG | M.Sen1512ORF4135P |
| 4140 | R | Sen5706IIP (100% identity) | CAGAG | Sen1512ORF4135P |
| 4145 | small effector SsaA | |||
| 12200 | IS6-like element IS26 family transposase | |||
| 12205 | M | M.SspS13ORF650P (19% identity) | M.Sen1512ORF12205AP | |
| 12210 | 49 aa hypothetical protein | |||
| 12215 | helix-turn-helix domain-containing protein | |||
| 12220 | 114 aa hypothetical protein | |||
| 12225 | IS6-like element IS26 family transposase | |||
| 12230 | M | M.SspS13ORF650P (80% identity) | M.Sen1512ORF12205BP | |
| 12235 | R | SspS13ORF650P (100% identity) | Sen1512ORF12205P | |
| 12240 | mobilization protein MobX | |||