Escherichia coli K194T1-1018 |
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Putative Escherichia coli K194T1-1018 RM systems
Ref: Zhou,J. unpublished
REBASE ref # 27398
| Sequence length: | GenBank #: | |
| Chromosome: | 4,601,153 bp | CP141787 |
| plasmid pK194T1-1018: | 69,429 bp | CP141788 |
REBASE acronym: Eco1018
Org_num: 73850
All begin VOY56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19150 | adenine/cytosine-specific restriction | |||
| 19155 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco1018ORF19160P |
| 19160 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco1018ORF19160P |
| 19165 | S | S.EcoVir2ORF19035P (100% identity) | AACNNNNNNGTGC | S.Eco1018ORF19160P |
| 19170 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1665 | cell division protein DamX | |||
| 1670 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1018DamP |
| 1675 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco1018ORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 8830 | phosphohydrolase | |||
| 8835 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1018DcmP |
| 8840 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco1018DcmP |
| 8845 | drug/metabolite exporter YedA | |||
| plasmid pK194T1-1018 | ||||
| 22670 | 56 aa hypothetical protein | |||
| 22675 | M | M.SmaQC11ORF52800P (100% identity) | M.Eco1018ORF22675P | |
| 22680 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13070 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13075 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco1018ORF13075P |
| 13080 | site-specific DNA recombinase | |||
| 19145 | GTPase | |||
| 19150 | R | SenHNK130MrrP (100% identity) | Eco1018MrrP | |
| 19155 | type I restriction-modification system | |||