Salmonella enterica 12 |
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Putative Salmonella enterica 12 RM systems
Ref: Portenko,S.A. et al. unpublished
REBASE ref # 38088
Complete sequence: 4,770,761 bp
GenBank #: CP141193
REBASE acronym: Senst12
Org_num: 73932
All begin U5L97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9790 | endoribonuclease SymE | |||
| 9795 | S | S.SenTS6ORF19230P (100% identity) | GAANNNNNNNNTCGC | S.Senst12ORF9800P |
| 9800 | M | M.StyTORF4575P (99% identity) | GAANNNNNNNNTCGC | M.Senst12ORF9800P |
| 9805 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Senst12ORF9800P |
| 9810 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1990 | thermonuclease family protein | |||
| 1995 | M | M.StyCORF187P (100% identity) | CCWGG | M.Senst12ORF1995P |
| 2000 | 56 aa hypothetical protein | |||
| 3390 | ribulose-phosphate 3-epimerase | |||
| 3395 | M | M.StyTDamP (100% identity) | GATC | M.Senst12DamP |
| 3400 | cell division protein DamX | |||
| 5450 | DUF2556 family protein | |||
| 5455 | M | M.StyUK1III (100% identity) | ATGCAT | M.Senst12ORF5455P |
| 5460 | DNA-binding transcriptional regulator Fis | |||
| 6765 | replication endonuclease | |||
| 6770 | M | M.StyTORF3409P (100% identity) | GATC | M.Senst12ORF6770P |
| 6775 | TraR/DksA family transcriptional regulator | |||
| 8565 | replication endonuclease | |||
| 8570 | M | M.StyTORF4329P (100% identity) | GATC | M.Senst12ORF8570P |
| 8575 | 3-5 exonuclease | |||
| 9660 | 64 aa hypothetical protein | |||
| 9665 | R | Senr1ORF19445P (100% identity) | Senst12ORF9665P | |
| 9670 | 91 aa hypothetical protein | |||
| 14565 | phosphohydrolase | |||
| 14570 | M | M.StyTDcmP (100% identity) | CCWGG | M.Senst12DcmP |
| 14575 | V | V.StyTDcmP (100% identity) | CCWGG | V.Senst12DcmP |
| 14580 | drug/metabolite exporter YedA | |||
| 19800 | DUF550 domain-containing protein | |||
| 19805 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Senst12ORF19805P |
| 19810 | ead/Ea22-like family protein | |||
| 19865 | DGQHR domain-containing protein | |||
| 19870 | M | M.StyTORF1926P (95% identity) | M.Senst12ORF19870P | |
| 19875 | DUF4060 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9805 | type I restriction-modification system | |||
| 9810 | R | StyTMrrP (100% identity) | Senst12MrrP | |
| 9815 | BrnT family toxin | |||