Pseudomonas aeruginosa DDRC3 |
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Putative Pseudomonas aeruginosa DDRC3 RM systems
Ref: Schmidt,A.K. et al. bioRxiv (2023)
REBASE ref # 38081
Complete sequence: 7,053,364 bp
GenBank #: CP137563
REBASE acronym: PaeDDRC3
Org_num: 73923
All begin R6U49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23715 | endonuclease NucS | |||
| 23720 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.PaeDDRC3ORF23725P |
| 23725 | M | M.PaesAG1ORF6375P (99% identity) | CACNNNNNNNRTGT | M.PaeDDRC3ORF23725P |
| 23730 | HNH endonuclease signature motif containing | |||
| 23735 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | PaeDDRC3ORF23725P |
| 23740 | peptidase M15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 475 | 142 aa hypothetical protein | |||
| 480 | M | M.PaeF058ORF21920P (100% identity) | M.PaeDDRC3ORF480P | |
| 485 | 266 aa hypothetical protein | |||
| 20915 | IS21-like element ISPst3 family transposase | |||
| 20920 | V | V.PaeLWORF27390P (99% identity) | V.PaeDDRC3ORF20925P | |
| ??? | M | M.Pae249ORF1280P (100% identity) | M.PaeDDRC3ORF20925P | |
| 20930 | metalloregulator ArsR/SmtB family transcription | |||
| 23725 | class I SAM-dependent DNA methyltransferase | |||
| 23730 | R | PaePae36ORFBP (100% identity) | PaeDDRC3ORF23730P | |
| 23735 | DEAD/DEAH box helicase family protein | |||
| 28530 | Arc family DNA-binding protein | |||
| 28535 | M | M.PaeZM03ORFEP (100% identity) | M.PaeDDRC3ORF28535P | |
| 28540 | nucleoid-associated protein YejK | |||
| 32760 | TnsA endonuclease N-terminal domain-containing | |||
| ??? | M | M.Sma866ORF16510P (100% identity) | M.PaeDDRC3ORF32765P | |
| 32770 | DNA topoisomerase III | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30320 | DUF4391 domain-containing protein | |||
| 30325 | M | M.PaeLo4ORF8025P (100% identity) | M.PaeDDRC3ORF30325P | |
| 30330 | R | PaeLo4ORF8025P (100% identity) | PaeDDRC3ORF30325P | |
| 30335 | VWA domain-containing protein | |||