Pseudomonas aeruginosa UKJ55 |
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Putative Pseudomonas aeruginosa UKJ55 RM systems
Ref: Braun,S.D. unpublished
REBASE ref # 33101
Complete sequence: 7,150,102 bp
GenBank #: CP141072
REBASE acronym: PaeUKJ55
Org_num: 73681
All begin U0536_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4325 | helix-turn-helix domain-containing protein | |||
| 4330 | R | PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | PaeUKJ55ORF4345P |
| 4335 | ATP-binding protein | |||
| 4340 | S | S.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | S.PaeUKJ55ORF4345P |
| 4345 | M | M.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | M.PaeUKJ55ORF4345P |
| 4350 | 94 aa hypothetical protein | |||
| 5945 | MarR family transcriptional regulator | |||
| 5950 | M | M.SacT018ORFDP (100% identity) | CAGNNNNNNCTCG | M.PaeUKJ55ORF5950P |
| 5955 | S | S.SacT018ORFDP (100% identity) | CAGNNNNNNCTCG | S.PaeUKJ55ORF5950P |
| 5960 | anticodon nuclease | |||
| 5965 | R | SacT018ORFDP (99% identity) | CAGNNNNNNCTCG | PaeUKJ55ORF5950P |
| 5970 | virulence RhuM family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10965 | recombinase family protein | |||
| 10970 | M | M.PmeTTORFEP (85% identity) | M.PaeUKJ55ORF10970P | |
| 10975 | R | PmeTTORFEP (100% identity) | CTCGAG | PaeUKJ55ORF10970P |
| 10980 | 82 aa hypothetical protein | |||
| 12150 | Arc family DNA-binding protein | |||
| 12155 | M | M.PaesAG1ORF5438P (100% identity) | M.PaeUKJ55ORF12155P | |
| 12160 | nucleoid-associated protein YejK | |||
| 26855 | DNA topoisomerase III | |||
| 26860 | M | M.Ssp405ORF8290P (100% identity) | M.PaeUKJ55ORF26860P | |
| 26865 | 185 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13875 | DUF262 domain-containing protein | |||
| 13880 | M | M.PspP16ORFGP (89% identity) | M.PaeUKJ55ORF13880P | |
| 13885 | IS6-like element IS6100 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26045 | type I restriction endonuclease subunit R | |||
| 26050 | R | Psp2021McrCP (100% identity) | PaeUKJ55McrCP | |
| 26055 | R | PaePae36McrBP (100% identity) | PaeUKJ55McrBP | |
| 26060 | type I Zorya anti-phage system protein ZorD | |||