Mycoplasmopsis cynos 98999 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mycoplasmopsis cynos 98999 RM systems
Ref: Framst,I. et al. unpublished
REBASE ref # 38004
Complete sequence: 1,008,816 bp
GenBank #: CP141044
REBASE acronym: Mcy98999
Org_num: 73648
All begin RRG53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3765 | 198 aa hypothetical protein | |||
| ??? | S | S4.Mcy94662ORF3265P (91% identity) | S4.Mcy98999ORF3785P | |
| 3775 | S | S1.Mcy80950ORF3410P (65% identity) | S3.Mcy98999ORF3785P | |
| 3780 | S | S2.Mcy94662ORF3265P (98% identity) | S2.Mcy98999ORF3785P | |
| 3785 | M | M.Mcy10142ORF698P (99% identity) | M.Mcy98999ORF3785P | |
| 3790 | S | S.Mcy993aORF770P (100% identity) | S1.Mcy98999ORF3785P | |
| 3795 | R | Mcy97732ORF2680P (99% identity) | Mcy98999ORF3785P | |
| 3800 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 795 | DNA topoisomerase IV subunit A | |||
| 800 | RM | Mcy94662ORF185P (84% identity) | Mcy98999ORF800AP | |
| 805 | RM | Mcy97732ORF3700P (13% identity) | Mcy98999ORF800BP | |
| 810 | energy-coupling factor transporter transmembrane | |||
| 1555 | hypoxanthine phosphoribosyltransferase | |||
| 1560 | M | M.Mcy85384ORF205P (99% identity) | M.Mcy98999ORF1560P | |
| 1565 | R | Mcy10142ORF232P (100% identity) | Mcy98999ORF1560P | |
| 1570 | amino acid permease | |||
| 3330 | 97 aa hypothetical protein | |||
| 3335 | R | Mcy10142ORF611P (99% identity) | Mcy98999ORF3340P | |
| 3340 | M | M.Mcy10142ORF611P (99% identity) | M.Mcy98999ORF3340P | |
| 3345 | Dam family site-specific | |||
| 3340 | DNA cytosine methyltransferase | |||
| ??? | M | M.Mcy993aORF1785P (83% identity) | M1.Mcy98999ORF3345P | |
| 3350 | 68 aa hypothetical protein | |||
| 3355 | R | Mcy10142IP (100% identity) | GATC | Mcy98999ORF3345P |
| 3360 | 377 aa hypothetical protein | |||
| 3365 | 328 aa hypothetical protein | |||
| 3370 | 62 aa hypothetical protein | |||
| 3375 | 47 aa hypothetical protein | |||
| 3380 | 224 aa hypothetical protein | |||
| 3385 | 115 aa hypothetical protein | |||
| 3390 | 116 aa hypothetical protein | |||
| 3395 | M | M.Mcy10142II (100% identity) | TGCA | M2.Mcy98999ORF3345P |
| 3400 | helix-turn-helix transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 770 | FAD-dependent oxidoreductase | |||
| 775 | R | Mcy87299ORF3805P (100% identity) | Mcy98999ORF780P | |
| 780 | M | M.Mcy87299ORF3805P (78% identity) | M.Mcy98999ORF780BP | |
| 785 | M | M.Mcy85384ORF3880AP (97% identity) | M.Mcy98999ORF780AP | |
| 790 | lysine--tRNA ligase | |||
| 3405 | IS3 family transposase | |||
| 3410 | M | M.Mcy10142ORF623P (95% identity) | M.Mcy98999ORF3410P | |
| 3415 | R | Mcy10142ORF623P (99% identity) | Mcy98999ORF3410P | |
| 3420 | IS256 family transposase | |||