Escherichia coli KE41 |
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Putative Escherichia coli KE41 RM systems
Ref: Hogins,J. et al. unpublished
REBASE ref # 37990
| Sequence length: | GenBank #: | |
| Chromosome: | 5,050,178 bp | CP141093 |
| plasmid unnamed1: | 72,337 bp | CP141094 |
| plasmid unnamed2: | 101,664 bp | CP141095 |
REBASE acronym: EcoKE41
Org_num: 73578
All begin U8P27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24075 | 322 aa hypothetical protein | |||
| 24080 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | EcoKE41ORF24085P |
| 24085 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.EcoKE41ORF24085P |
| 24090 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.EcoKE41ORF24085P |
| 24095 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5190 | cell division protein DamX | |||
| 5195 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoKE41DamP |
| 5200 | ribulose-phosphate 3-epimerase | |||
| 5790 | DUF2556 family protein | |||
| 5795 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.EcoKE41ORF5795P |
| 5800 | DNA-binding transcriptional regulator Fis | |||
| 8005 | N-6 DNA methylase | |||
| 8010 | M | M.Sen523ORF9345P (100% identity) | M.EcoKE41ORF8010P | |
| 8015 | 130 aa hypothetical protein | |||
| 10355 | DUF1382 family protein | |||
| 10360 | M | M.Eho218ORF16395P (100% identity) | GATC | M.EcoKE41ORF10360P |
| 10365 | PerC family transcriptional regulator | |||
| 13475 | phosphohydrolase | |||
| 13480 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoKE41DcmP |
| 13485 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoKE41DcmP |
| 13490 | drug/metabolite exporter YedA | |||
| plasmid unnamed1 | ||||
| 24720 | 103 aa hypothetical protein | |||
| 24725 | M | M.UbapRSB107ORFAP (99% identity) | M.EcoKE41ORF24725P | |
| 24730 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25430 | 103 aa hypothetical protein | |||
| 25435 | M | M.Sso80ORF24890P (99% identity) | M.EcoKE41ORF25435P | |
| 25440 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24095 | endoribonuclease SymE | |||
| ??? | R | Ecos137GmrSDP (100% identity) | EcoKE41GmrSDP | |
| 24110 | Rpn family recombination-promoting | |||