Escherichia coli KE48 |
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Putative Escherichia coli KE48 RM systems
Ref: Hogins,J. et al. unpublished
REBASE ref # 37990
Complete sequence: 4,638,488 bp
GenBank #: CP141084
REBASE acronym: EcoKE48
Org_num: 73580
All begin U8P30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17535 | endoribonuclease SymE | |||
| 17540 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoKE48ORF17545P |
| 17545 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.EcoKE48ORF17545P |
| 17550 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoKE48ORF17545P |
| 17555 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12030 | ribulose-phosphate 3-epimerase | |||
| 12035 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoKE48DamP |
| 12040 | cell division protein DamX | |||
| 17355 | 105 aa hypothetical protein | |||
| 17360 | R | EcoT073ORF21650P (100% identity) | EcoKE48ORF17360P | |
| 17365 | HNH endonuclease | |||
| 19770 | phosphohydrolase | |||
| 19775 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoKE48DcmP |
| 19780 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.EcoKE48DcmP |
| 19785 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17305 | integrase arm-type DNA-binding domain-containing | |||
| 17310 | R | EcoUTI89IP (100% identity) | CACAG | EcoKE48ORF17315P |
| 17315 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoKE48ORF17315P |
| 17320 | ATP-binding domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17520 | 26 aa hypothetical protein | |||
| ??? | R | EcoUTI89GmrSDP (100% identity) | EcoKE48GmrSDP | |
| 17535 | endoribonuclease SymE | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 180 | NinE family protein | |||
| 185 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoKE48ORF185P |
| 190 | recombination protein NinB | |||