Salmonella enterica subsp. enterica serovar Newport CFSAN001636 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN001636 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 38014
| Sequence length: | GenBank #: | |
| Chromosome: | 4,842,028 bp | CP140744 |
| plasmid pCFSAN001636: | 85,826 bp | CP140745 |
REBASE acronym: Sen36
Org_num: 73704
All begin DLM96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20400 | 3-5 exonuclease | |||
| 20405 | S | S.Sens29927ORF20150P (100% identity) | S1.Sen36ORF20410P | |
| 20410 | M | M2.SenXORF20095P (100% identity) | M2.Sen36ORF20410P | |
| 20415 | 44 aa hypothetical protein | |||
| 20420 | restriction endonuclease | |||
| 20425 | M | M.Sens29927ORF20165P (100% identity) | M1.Sen36ORF20410P | |
| 20430 | S | S.Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | S2.Sen36ORF20410P |
| 20435 | R | Sens29927ORF20165P (100% identity) | Sen36ORF20410P | |
| 20440 | DUF5655 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1950 | cell division protein DamX | |||
| 1955 | M | M.StyTDamP (100% identity) | GATC | M.Sen36DamP |
| 1960 | ribulose-phosphate 3-epimerase | |||
| 2440 | DUF2556 family protein | |||
| 2445 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen36ORF2445P |
| 2450 | DNA-binding transcriptional regulator Fis | |||
| 20550 | YebC/PmpR family DNA-binding transcriptional | |||
| 20555 | R | SenXORF20240P (100% identity) | Sen36ORF20555P | |
| 20560 | 191 aa hypothetical protein | |||
| 20565 | 97 aa hypothetical protein | |||
| 20570 | M | M.SenXORF20255P (100% identity) | RCCGGY | M.Sen36ORF20570P |
| 20575 | R | SenXORF20255P (100% identity) | RCCGGY | Sen36ORF20570P |
| 20580 | DUF3696 domain-containing protein | |||
| plasmid pCFSAN001636 | ||||
| 23855 | 232 aa hypothetical protein | |||
| 23860 | M | M.SenN1543ORF26190P (98% identity) | M.Sen36ORF23860P | |
| 23865 | recombination-associated protein RdgC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18160 | small effector SsaA | |||
| 18165 | R | Sens29927ORF17960P (99% identity) | CAGAG | Sen36ORF18170P |
| 18170 | M | M.Sens29927ORF17960P (100% identity) | CAGAG | M.Sen36ORF18170P |
| 18175 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20415 | 44 aa hypothetical protein | |||
| 20420 | R | Sens29927MrrP (100% identity) | Sen36MrrP | |
| 20425 | class I SAM-dependent DNA methyltransferase | |||