Salmonella enterica subsp. enterica serovar Newport JY-221A-RVX |
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Putative Salmonella enterica subsp. enterica serovar Newport JY-221A-RVX RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 38014
Complete sequence: 4,883,866 bp
GenBank #: CP140738
REBASE acronym: SenRVX
Org_num: 73705
All begin DLM89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3130 | DUF5655 domain-containing protein | |||
| 3135 | R | Sens29927ORF20165P (100% identity) | SenRVXORF3145P | |
| 3140 | S | S.Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | S1.SenRVXORF3145P |
| 3145 | M | M.Sens29927ORF20165P (100% identity) | M2.SenRVXORF3145P | |
| 3150 | restriction endonuclease | |||
| 3155 | 44 aa hypothetical protein | |||
| 3160 | M | M2.SenXORF20095P (100% identity) | M1.SenRVXORF3145P | |
| 3165 | S | S.Sens29927ORF20150P (100% identity) | S2.SenRVXORF3145P | |
| 3170 | 3-5 exonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3010 | 204 aa hypothetical protein | |||
| 3015 | R | SenXORF20240P (100% identity) | SenRVXORF3015P | |
| 3020 | YebC/PmpR family DNA-binding transcriptional | |||
| 11915 | PerC family transcriptional regulator | |||
| 11920 | M | M.StyUK1V (100% identity) | GATC | M.SenRVXORF11920P |
| 11925 | RusA family crossover junction | |||
| 21465 | DNA-binding transcriptional regulator Fis | |||
| 21470 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRVXORF21470P |
| 21475 | DUF2556 family protein | |||
| 21950 | ribulose-phosphate 3-epimerase | |||
| 21955 | M | M.StyTDamP (100% identity) | GATC | M.SenRVXDamP |
| 21960 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5425 | MFS transporter | |||
| 5430 | M | M.SenTTBORF5430P (100% identity) | CAGAG | M.SenRVXORF5430P |
| 5435 | R | Sens29927ORF17960P (100% identity) | CAGAG | SenRVXORF5430P |
| 5440 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3145 | class I SAM-dependent DNA methyltransferase | |||
| 3150 | R | SenTTBMrrP (100% identity) | SenRVXMrrP | |
| 3155 | 44 aa hypothetical protein | |||