Escherichia coli TOK-001 |
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Putative Escherichia coli TOK-001 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 37992
| Sequence length: | GenBank #: | |
| Chromosome: | 4,705,056 bp | AP018395 |
| plasmid pECTOK-001_1: | 219,009 bp | AP018396 |
| plasmid pECTOK-001_2: | 201,884 bp | AP018397 |
REBASE acronym: EcoK001
Org_num: 73593
All begin ECTOK1_C, ECTOK1_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 37110 | aspartate/alanine antiporter | |||
| 37120 | M | M.KpnCRE04ORF32250P (100% identity) | M.EcoK001ORF37120P | |
| 37130 | S | S.KpnCRE04ORF32250P (100% identity) | S.EcoK001ORF37120P | |
| 37140 | R | KpnCRE04ORF32250P (100% identity) | EcoK001ORF37120P | |
| 37150 | transposase | |||
| plasmid pECTOK-001_1 | ||||
| 12250 | ISKpn25 transposase | |||
| 12260 | R | KpnCRE04ORF32250P (100% identity) | EcoK001ORF12280P | |
| 12270 | S | S.KpnCRE04ORF32250P (100% identity) | S.EcoK001ORF12280P | |
| 12280 | M | M.KpnCRE04ORF32250P (100% identity) | M.EcoK001ORF12280P | |
| 12290 | 256 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12170 | 80 aa hypothetical protein | |||
| 12180 | M | M.Eba4ORF12910P (97% identity) | M.EcoK001ORF12180P | |
| 12190 | 52 aa hypothetical protein | |||
| 20430 | inner membrane transporter YedA | |||
| 20440 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.EcoK001DcmP |
| 20450 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoK001DcmP |
| 20460 | hydrolase | |||
| 27060 | replication protein | |||
| 27070 | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.EcoK001ORF27070P |
| 27080 | 75 aa hypothetical protein | |||
| 32920 | DNA-binding protein Fis | |||
| 32930 | M | M.EcoW102ORF2375P (99% identity) | ATGCAT | M.EcoK001ORF32930P |
| 32940 | 59 aa hypothetical protein | |||
| 34130 | ribulose-phosphate 3-epimerase | |||
| 34140 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoK001DamP |
| 34150 | cell division protein DamX | |||
| 43490 | 100 aa hypothetical protein | |||
| ??? | R | Sso8ORF19860P (100% identity) | EcoK001ORF43500P | |
| 43510 | 9-O-acetyl-N-acetylneuraminic acid | |||
| plasmid pECTOK-001_1 | ||||
| 12030 | 212 aa hypothetical protein | |||
| 12040 | M | M.Sma079ORF28300P (100% identity) | M.EcoK001ORF12040P | |
| 12050 | 139 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 43460 | 106 aa hypothetical protein | |||
| ??? | M | M.SflN116ORF19490P (46% identity) | M.EcoK001ORF43470P | |
| 43480 | helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pECTOK-001_2 | ||||
| 21730 | 62 aa hypothetical protein | |||
| 21740 | R | KpnM9111McrBP (100% identity) | EcoK001McrBP | |
| 21750 | R | PgeFB2McrC2P (100% identity) | EcoK001McrCP | |
| 21760 | transposase | |||