Salmonella enterica PNUSAS200857 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica PNUSAS200857 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
| Sequence length: | GenBank #: | |
| Chromosome: | 4,719,085 bp | CP140405 |
| plasmid unnamed1: | 93,183 bp | CP140406 |
REBASE acronym: Sen0857
Org_num: 73694
All begin U2S68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19415 | 322 aa hypothetical protein | |||
| 19420 | R | SenT075BORF19680P (100% identity) | CACNNNNNNNRTANYC | Sen0857ORF19425P |
| 19425 | M | M.SenT075BORF19680P (100% identity) | CACNNNNNNNRTANYC | M.Sen0857ORF19425P |
| 19430 | S | S.SenT075BORF19680P (100% identity) | CACNNNNNNNRTANYC | S.Sen0857ORF19425P |
| 19435 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1770 | cell division protein DamX | |||
| 1775 | M | M.StyTDamP (100% identity) | GATC | M.Sen0857DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2260 | DUF2556 family protein | |||
| 2265 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen0857ORF2265P |
| 2270 | DNA-binding transcriptional regulator Fis | |||
| 19565 | integrase | |||
| 19570 | R | SenT075BORF19820P (100% identity) | Sen0857ORF19570P | |
| 19575 | IS3 family transposase | |||
| 19590 | conjugal transfer protein TraD | |||
| 19595 | R | SenT075BORF19850P (100% identity) | GCTNAGC | Sen0857ORF19600P |
| 19600 | M | M.SenT075BORF19850P (100% identity) | GCTNAGC | M.Sen0857ORF19600P |
| 19605 | integrase arm-type DNA-binding domain-containing | |||
| plasmid unnamed1 | ||||
| 22950 | 103 aa hypothetical protein | |||
| 22955 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Sen0857ORF22955P |
| 22960 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17155 | small effector SsaA | |||
| 17160 | R | SenT075BORF17425P (100% identity) | CAGAG | Sen0857ORF17165P |
| 17165 | M | M.SenT075BORF17425P (100% identity) | CAGAG | M.Sen0857ORF17165P |
| 17170 | MFS transporter | |||