Salinicola species LHM |
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Putative Salinicola species LHM RM systems
Ref: Lu,H. unpublished
REBASE ref # 38012
Complete sequence: 4,220,726 bp
GenBank #: CP140261
REBASE acronym: SspLHM
Org_num: 73692
All begin R5R73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6540 | 115 aa hypothetical protein | |||
| 6545 | M | M.HspSG2L4ORF4595P (76% identity) | M.SspLHMORF6545P | |
| 6550 | S | S.Hme43005ORF9125P (58% identity) | S.SspLHMORF6545P | |
| 6555 | GIY-YIG nuclease family protein | |||
| 6560 | 247 aa hypothetical protein | |||
| 6565 | 150 aa hypothetical protein | |||
| 6570 | 50 aa hypothetical protein | |||
| 6575 | SOS response-associated peptidase | |||
| 6580 | R | HhaAORF2165P (82% identity) | SspLHMORF6545P | |
| 6585 | 273 aa hypothetical protein | |||
| 18290 | SDR family oxidoreductase | |||
| 18295 | S | S1.PspS343ORF5995P (76% identity) | S1.SspLHMORF18300P | |
| 18300 | M | M.Hme43005ORF15870P (96% identity) | M.SspLHMORF18300P | |
| 18305 | virulence RhuM family protein | |||
| 18310 | S | S.MspALG8ORF9110P (42% identity) | S2.SspLHMORF18300P | |
| 18315 | DUF2188 domain-containing protein | |||
| 18320 | HAD family hydrolase | |||
| 18325 | R | Hme43005ORF15870P (97% identity) | SspLHMORF18300P | |
| 18330 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1405 | phage portal protein | |||
| 1410 | M | M.SsoSMB35ORF14825P (95% identity) | M.SspLHMORF1410P | |
| 1415 | 481 aa hypothetical protein | |||
| 1995 | 115 aa hypothetical protein | |||
| 2000 | RM | DspNSZ14ORF1129P (40% identity) | SspLHMORF2000P | |
| 2005 | IS1380 family transposase | |||
| 4690 | 57 aa hypothetical protein | |||
| ??? | M | M.SfoGS2ORF14365P (50% identity) | M.SspLHMORFAP | |
| 4695 | 178 aa hypothetical protein | |||
| 13825 | LysE family translocator | |||
| 13830 | M | M.DspA832ORF19785P (54% identity) | M.SspLHMORF13830P | |
| 13835 | 418 aa hypothetical protein | |||