Salmonella enterica subsp. enterica serovar Abortusovis 405987R1_S50 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Abortusovis 405987R1_S50 RM systems
Ref: Payne,M.J. et al. unpublished
REBASE ref # 38013
Complete sequence: 4,779,500 bp
GenBank #: CP130616
REBASE acronym: SenS50
Org_num: 73698
All begin Q1J21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19930 | 3-5 exonuclease | |||
| 19935 | S | S.Sens29927ORF20150P (100% identity) | S1.SenS50ORF19940P | |
| 19940 | M | M2.SenXORF20095P (100% identity) | M2.SenS50ORF19940P | |
| 19945 | 44 aa hypothetical protein | |||
| 19950 | restriction endonuclease | |||
| 19955 | M | M.Sens29927ORF20165P (100% identity) | M1.SenS50ORF19940P | |
| 19960 | S | S2.SenS48ORF19910P (100% identity) | CCGANNNNNGTC | S2.SenS50ORF19940P |
| 19965 | R | Sens29927ORF20165P (100% identity) | SenS50ORF19940P | |
| 19970 | endonuclease NucS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1770 | cell division protein DamX | |||
| 1775 | M | M.StyTDamP (100% identity) | GATC | M.SenS50DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2260 | DUF2556 family protein | |||
| 2265 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS50ORF2265P |
| 2270 | DNA-binding transcriptional regulator Fis | |||
| 5740 | TraR/DksA family transcriptional regulator | |||
| 5745 | M | M.SenS48ORF5745P (100% identity) | M.SenS50ORF5745P | |
| 5750 | replication endonuclease | |||
| 9405 | phosphohydrolase | |||
| 9410 | M | M.SensTJX21DcmP (100% identity) | CCWGG | M.SenS50DcmP |
| 9415 | V | V.SenS48DcmP (100% identity) | V.SenS50DcmP | |
| 9420 | drug/metabolite exporter YedA | |||
| 20085 | YebC/PmpR family DNA-binding transcriptional | |||
| 20090 | R | SenS48ORF20060P (100% identity) | SenS50ORF20090P | |
| 20095 | phosphoribosyl transferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17755 | small effector SsaA | |||
| 17760 | R | SenS48ORF17435P (100% identity) | CAGAG | SenS50ORF17765P |
| 17765 | M | M.Ssp8103ORF16670P (100% identity) | CAGAG | M.SenS50ORF17765P |
| 17770 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19945 | 44 aa hypothetical protein | |||
| 19950 | R | Sens29927MrrP (100% identity) | SenS50MrrP | |
| 19955 | class I SAM-dependent DNA methyltransferase | |||