Streptococcus suis Ss_46 |
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Putative Streptococcus suis Ss_46 RM systems
Ref: Uruen,C. and Arenas,J.A. unpublished
REBASE ref # 38023
Complete sequence: 2,245,915 bp
GenBank #: CP139878
REBASE acronym: SsuSs46
Org_num: 73758
All begin U0697_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1140 | 310 aa hypothetical protein | |||
| 1145 | S | S.SsuHB18ORFBP (100% identity) | S.SsuSs46ORF1155P | |
| 1150 | DUF2806 domain-containing protein | |||
| 1155 | M | M.SsuHB18ORFBP (100% identity) | M.SsuSs46ORF1155P | |
| 1160 | R | SsuHB18ORFBP (100% identity) | SsuSs46ORF1155P | |
| 1165 | FAD-containing oxidoreductase | |||
| 2900 | ribose-5-phosphate isomerase RpiA | |||
| 2905 | S | S2.SsuSs109ORF955P (99% identity) | S2.SsuSs46ORF2915P | |
| 2910 | S | S1.SsuWTORFAP (100% identity) | S1.SsuSs46ORF2915P | |
| 2915 | M | M.SsuWTORFAP (100% identity) | M.SsuSs46ORF2915P | |
| 2920 | R | SsuiS10ORFBP (100% identity) | SsuSs46ORF2915P | |
| 2925 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 7740 | transposase | |||
| 7745 | M | M.SsuWTORFEP (100% identity) | M.SsuSs46ORF7745P | |
| 7750 | S | S1.SsuMA2ORFCP (98% identity) | S1.SsuSs46ORF7745P | |
| 7755 | S | S3.SagSA111ORF272P (100% identity) | S2.SsuSs46ORF7745P | |
| 7760 | site-specific tyrosine recombinase/integron | |||
| ??? | S | S3.SsuMA2ORFCP (100% identity) | S3.SsuSs46ORF7745P | |
| 7775 | DUF6430 domain-containing protein | |||
| 7780 | TIR domain-containing protein | |||
| 7785 | R | SsuWTORFEP (100% identity) | SsuSs46ORF7745P | |
| 7790 | ATP-binding protein | |||
| 8310 | site-specific integrase | |||
| 8315 | S | S2.SsuWTORFDP (95% identity) | S2.SsuSs46ORF8330P | |
| 8320 | R | SsuWTORFDP (100% identity) | SsuSs46ORF8330P | |
| 8325 | S | S.SsuiS10ORFAP (50% identity) | S1.SsuSs46ORF8330P | |
| 8330 | M | M.SsuWTORFDP (100% identity) | M.SsuSs46ORF8330P | |
| 8335 | serine--tRNA ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1905 | 142 aa hypothetical protein | |||
| 1910 | M | M.SsuMA6ORFEP (100% identity) | M.SsuSs46ORF1910P | |
| 1915 | replication initiator protein A | |||
| 2050 | 82 aa hypothetical protein | |||
| 2055 | M | M1.SspHKU75ORF8885P (96% identity) | M.SsuSs46ORF2055P | |
| 2060 | helix-turn-helix domain-containing protein | |||
| 8930 | valine--tRNA ligase | |||
| 8935 | M | M.SsuWTORFFP (98% identity) | M.SsuSs46ORF8935P | |
| 8940 | R | R2.SsuWTORFFP (100% identity) | R1.SsuSs46ORF8935P | |
| 8945 | R | R1.SsuHB18ORFFP (99% identity) | R2.SsuSs46ORF8935P | |
| 8950 | Fic family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1200 | IS200/IS605 family transposase | |||
| 1205 | R | SsuMA6ORFBP (99% identity) | GCGATD | SsuSs46ORF1210P |
| 1210 | M | M.Ssu0001ORFAP (100% identity) | GCGATD | M.SsuSs46ORF1210P |
| 1215 | DUF3885 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 400 | glutamine-hydrolyzing GMP synthase | |||
| 405 | R | SsuSs109McrCP (100% identity) | SsuSs46McrCP | |
| 410 | R | SsuWTMcrBP (99% identity) | SsuSs46McrBP | |
| 415 | 262 aa hypothetical protein | |||