Streptococcus suis Ss_109 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptococcus suis Ss_109 RM systems
Ref: Uruen,C. and Arenas,J.A. unpublished
REBASE ref # 38023
Complete sequence: 2,274,578 bp
GenBank #: CP139876
REBASE acronym: SsuSs109
Org_num: 73753
All begin U0700_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 945 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 950 | R | SsuNLS50ORF3680P (99% identity) | SsuSs109ORF955P | |
| 955 | M | M.SsuWTORFAP (100% identity) | M.SsuSs109ORF955P | |
| 960 | S | S1.SsuWTORFAP (100% identity) | S1.SsuSs109ORF955P | |
| 965 | S | S2.SsuNLS50ORF3680P (100% identity) | S2.SsuSs109ORF955P | |
| 970 | ribose-5-phosphate isomerase RpiA | |||
| 1810 | FAD-containing oxidoreductase | |||
| 1815 | R | SsuiS10ORFCP (70% identity) | CCAANNNNNNTTC | SsuSs109ORF1830AP |
| 1820 | IS110 family transposase | |||
| 1825 | R | SsuNLS50ORF4890BP (100% identity) | CCAANNNNNNTTC | SsuSs109ORF1830BP |
| 1830 | M | M.SsuNLS50ORF4890P (100% identity) | CCAANNNNNNTTC | M.SsuSs109ORF1830P |
| 1835 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.SsuSs109ORF1830P |
| 1840 | 310 aa hypothetical protein | |||
| 6130 | serine--tRNA ligase | |||
| 6135 | M | M.SsuWTORFDP (100% identity) | M.SsuSs109ORF6135P | |
| 6140 | S | S.SsuiS10ORFAP (50% identity) | S1.SsuSs109ORF6135P | |
| 6145 | R | SsuNLS50ORF9390P (99% identity) | SsuSs109ORF6135P | |
| 6150 | S | S2.SsuT15ORF9320P (95% identity) | S2.SsuSs109ORF6135P | |
| 6155 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2135 | GTP pyrophosphokinase | |||
| 2140 | RM | SsuNLS50ORF5190P (100% identity) | SsuSs109ORF2140P | |
| 2145 | S | S.SsuNLS50ORF5190P (100% identity) | S.SsuSs109ORF2140P | |
| 2150 | 261 aa hypothetical protein | |||
| 5175 | 142 aa hypothetical protein | |||
| 5180 | M | M.SsuNLS50ORF8430P (100% identity) | M.SsuSs109ORF5180P | |
| 5185 | replication initiator protein A | |||
| 5435 | 120 aa hypothetical protein | |||
| 5440 | R | SsuDNS11ORF7970P (100% identity) | SsuSs109ORF5445P | |
| 5445 | M | M.SsuWTORFFP (98% identity) | M.SsuSs109ORF5445P | |
| 5450 | valine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1700 | DUF3885 domain-containing protein | |||
| 1705 | M | M.SsuNLS50ORF4760P (100% identity) | M.SsuSs109ORF1705P | |
| 1710 | R | SsuNLS50ORF4760P (100% identity) | SsuSs109ORF1705P | |
| 1715 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2570 | 262 aa hypothetical protein | |||
| 2575 | R | SsuWTMcrBP (100% identity) | SsuSs109McrBP | |
| 2580 | R | SsuSs46McrCP (100% identity) | SsuSs109McrCP | |
| 2585 | glutamine-hydrolyzing GMP synthase | |||