Citrobacter freundii UKJ86 |
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Putative Citrobacter freundii UKJ86 RM systems
Ref: Braun,S.D. unpublished
REBASE ref # 33101
| Sequence length: | GenBank #: | |
| Chromosome: | 4,886,607 bp | CP139850 |
| plasmid pUKJ86_1: | 370,755 bp | CP139849 |
REBASE acronym: CfrUKJ86
Org_num: 73551
All begin U0541_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4810 | 5-nucleotidase | |||
| 4815 | S | S.CspCF971ORF6870P (32% identity) | S2.CfrUKJ86ORF4825P | |
| 4820 | S | S.CpoK218ORF24245P (65% identity) | S1.CfrUKJ86ORF4825P | |
| 4825 | M | M.CspCF971ORF6870P (100% identity) | M.CfrUKJ86ORF4825P | |
| 4830 | R | CspCF971ORF6870P (100% identity) | CfrUKJ86ORF4825P | |
| 4835 | toll/interleukin-1 receptor domain-containing | |||
| 15640 | SprT family zinc-dependent metalloprotease | |||
| 15645 | R | CfrMH16IP (100% identity) | ACAGNNNNNCCT | CfrUKJ86ORF15655P |
| 15650 | S | S.CfrF2021ORF10015P (100% identity) | ACAGNNNNNCCT | S.CfrUKJ86ORF15655P |
| 15655 | M | M.CfrMH16I (100% identity) | ACAGNNNNNCCT | M.CfrUKJ86ORF15655P |
| 15675 | CDP-diacylglycerol--glycerol-3-phosphate | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5015 | helix-turn-helix transcriptional regulator | |||
| 5020 | R | Cfr862ORF20900P (99% identity) | CfrUKJ86ORF5020P | |
| 5025 | endoribonuclease SymE | |||
| 15865 | drug/metabolite exporter YedA | |||
| 15870 | V | V.CspS39ORF13780P (99% identity) | V.CfrUKJ86ORF15875P | |
| 15875 | M | M.CspSL156ORF9755P (100% identity) | CCWGG | M.CfrUKJ86ORF15875P |
| 15880 | phosphohydrolase | |||
| 17975 | DUF1133 family protein | |||
| 17980 | M | M.CbrC05ORF7510P (96% identity) | M.CfrUKJ86ORF17980P | |
| 17985 | recombination protein NinG | |||
| 22915 | DNA-binding transcriptional regulator Fis | |||
| 22920 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.CfrUKJ86ORF22920P |
| 22925 | DUF2556 family protein | |||
| 23460 | ribulose-phosphate 3-epimerase | |||
| 23465 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrUKJ86DamP |
| 23470 | cell division protein DamX | |||
| plasmid pUKJ86_1 | ||||
| 705 | 273 aa hypothetical protein | |||
| 710 | M | M1.SenF8025ORFBP (100% identity) | M.CfrUKJ86ORF710P | |
| 715 | DNA-binding protein | |||
| 1670 | thermonuclease family protein | |||
| 1675 | M | M.SenZC055ORF26240P (100% identity) | CCWGG | M.CfrUKJ86ORF1675P |
| 1680 | 55 aa hypothetical protein | |||
| 1915 | recombinase family protein | |||
| 1920 | R | YpsR1ORFAP (100% identity) | CCWGG | CfrUKJ86ORF1925P |
| 1925 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.CfrUKJ86ORF1925P |
| 1930 | IS1 family transposase | |||