Clostridioides difficile SC083-01-01 |
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Putative Clostridioides difficile SC083-01-01 RM systems
Ref: Schueler,M.A. et al. unpublished
REBASE ref # 37944
| Sequence length: | GenBank #: | |
| Chromosome: | 4,122,919 bp | CP132144 |
| plasmid p830101_1: | 45,313 bp | CP132145 |
REBASE acronym: Cdi0101
Org_num: 73381
All begin CDIF830101_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4990 | 53 aa hypothetical protein | |||
| 5000 | C | C.PdiZ31ORF415P (100% identity) | C.Cdi0101ORF5010P | |
| 5010 | RM | Cdo002IV (100% identity) | GCMGAAG | Cdi0101ORF5010P |
| 5020 | 224 aa hypothetical protein | |||
| 29000 | Patatin-like phospholipase | |||
| 29010 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi0101ORF29010P |
| 29020 | 132 aa hypothetical protein | |||
| 32340 | Caspase domain protein | |||
| 32350 | M | M.Cdo002V (100% identity) | GGNCC | M.Cdi0101ORF32350P |
| 32360 | R | CdiS0253ORF15585P (100% identity) | GGNCC | Cdi0101ORF32350P |
| 32370 | 92 aa hypothetical protein | |||
| 32460 | SIR2-like domain protein | |||
| 32470 | M | M.Cdo002II (100% identity) | GATC | M.Cdi0101ORF32470P |
| 32480 | 115 aa hypothetical protein | |||
| plasmid p830101_1 | ||||
| 38080 | N-acetylmuramoyl-L-alanine amidase | |||
| 38090 | M | M.Cdo002ORFAP (100% identity) | M.Cdi0101ORF38090P | |
| 38100 | 171 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22070 | DNA-binding transcriptional activator HyfR | |||
| 22080 | R | Cdo002McrCP (100% identity) | Cdi0101McrCP | |
| 22090 | R | Pdi6602McrBP (100% identity) | Cdi0101McrBP | |
| 22100 | 240 aa hypothetical protein | |||