Clostridioides difficile B1_2 |
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Putative Clostridioides difficile B1_2 RM systems
Ref: Schuler,M. et al. unpublished
REBASE ref # 37943
Complete sequence: 4,194,230 bp
GenBank #: CP132141
REBASE acronym: CdiB12
Org_num: 73378
All begin CDIFB12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 34960 | HTH-type transcriptional regulator MntR | |||
| 34970 | R | CdiRSS13ORF16830P (98% identity) | CdiB12ORF35010P | |
| 34980 | 116 aa hypothetical protein | |||
| 34990 | 71 aa hypothetical protein | |||
| 35000 | S | S.Cdi21305II (76% identity) | S.CdiB12ORF35010P | |
| 35010 | M | M.Cpe8081I (99% identity) | M.CdiB12ORF35010P | |
| 35020 | Conjugative transposon protein TcpC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 28740 | Patatin-like phospholipase | |||
| 28750 | M | M.Pdi9689I (100% identity) | CAAAAA | M.CdiB12ORF28750P |
| 28760 | 132 aa hypothetical protein | |||
| 32250 | LytTr DNA-binding domain protein | |||
| 32260 | M | M.Pdi9689DndCP (100% identity) | M.CdiB12DndCP | |
| 32270 | AAA domain protein | |||
| 32260 | 488 aa hypothetical protein | |||
| 32270 | M | M.Pdi9689DndDP (100% identity) | M.CdiB12DndDP | |
| 32280 | DNA sulfur modification protein DndE | |||
| 32270 | AAA domain protein | |||
| 32280 | M | M.Pdi9689DndEP (100% identity) | M.CdiB12DndEP | |
| 32290 | 1078 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21830 | DNA-binding transcriptional activator HyfR | |||
| 21840 | R | Pdi9689McrCP (100% identity) | CdiB12McrCP | |
| 21850 | R | Pdi9689McrBP (100% identity) | CdiB12McrBP | |
| 21860 | 240 aa hypothetical protein | |||