Clostridioides difficile J2_1 |
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Putative Clostridioides difficile J2_1 RM systems
Ref: Boeer,T. et al. unpublished
REBASE ref # 37737
| Sequence length: | GenBank #: | |
| Chromosome: | 4,081,925 bp | CP134690 |
| plasmid pJ21_1: | 46,261 bp | CP134691 |
REBASE acronym: CdiJ21
Org_num: 73379
All begin CDIFJ21_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4990 | 53 aa hypothetical protein | |||
| 5000 | C | C.PdiZ31ORF415P (100% identity) | C.CdiJ21ORF5010P | |
| 5010 | RM | Cdo002IV (100% identity) | GCMGAAG | CdiJ21ORF5010P |
| 5020 | 224 aa hypothetical protein | |||
| 28430 | Patatin-like phospholipase | |||
| 28440 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.CdiJ21ORF28440P |
| 28450 | 132 aa hypothetical protein | |||
| 31780 | Caspase domain protein | |||
| 31790 | M | M.Cdo002V (100% identity) | GGNCC | M.CdiJ21ORF31790P |
| 31800 | R | CdiS0253ORF15585P (100% identity) | GGNCC | CdiJ21ORF31790P |
| 31810 | 92 aa hypothetical protein | |||
| 31900 | SIR2-like domain protein | |||
| 31910 | M | M.Cdo002II (100% identity) | GATC | M.CdiJ21ORF31910P |
| 31920 | 115 aa hypothetical protein | |||
| plasmid pJ21_1 | ||||
| 37230 | N-acetylmuramoyl-L-alanine amidase | |||
| 37240 | M | M.Cdo002ORFAP (100% identity) | M.CdiJ21ORF37240P | |
| 37250 | 171 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21450 | DNA-binding transcriptional activator HyfR | |||
| 21460 | R | CdiBI9McrCP (99% identity) | CdiJ21McrCP | |
| 21470 | R | Pdi6602McrBP (100% identity) | CdiJ21McrBP | |
| 21480 | 240 aa hypothetical protein | |||