Clostridium tetani KHSU-154301-001 |
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Putative Clostridium tetani KHSU-154301-001 RM systems
Ref: Shitada,C. et al. mSphere e0036923 (2023)
REBASE ref # 37945
| Sequence length: | GenBank #: | |
| Chromosome: | 2,786,928 bp | AP029031 |
| plasmid pKHSU-154301-001: | 66,968 bp | AP029032 |
REBASE acronym: Cte1001
Org_num: 73384
All begin K154301001_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7820 | metal-sensing transcriptional repressor | |||
| 7830 | S | S4.Cte32ORF7970P (95% identity) | S3.Cte1001ORF7860P | |
| 7840 | R | Cte37ORF7860P (100% identity) | Cte1001ORF7860P | |
| 7850 | S | S2.Cte37ORF7860P (100% identity) | S2.Cte1001ORF7860P | |
| 7860 | M | M.Cte37ORF7860P (100% identity) | M.Cte1001ORF7860P | |
| 7870 | S | S1.Cte37ORF7860P (100% identity) | S1.Cte1001ORF7860P | |
| 7880 | site-specific integrase | |||
| 18340 | 918 aa hypothetical protein | |||
| 18350 | R | Cte37ORF17560P (100% identity) | Cte1001ORF18370P | |
| 18360 | S | S.Ctecb2ORF9040P (100% identity) | S.Cte1001ORF18370P | |
| 18370 | M | M.Ctecb2ORF9040P (100% identity) | M.Cte1001ORF18370P | |
| 18380 | 197 aa hypothetical protein | |||
| 23880 | SprT family zinc-dependent metalloprotease | |||
| 23890 | R | Cte37ORF23170P (100% identity) | Cte1001ORF23970P | |
| 23900 | 206 aa hypothetical protein | |||
| 23910 | 284 aa hypothetical protein | |||
| 23920 | 117 aa hypothetical protein | |||
| 23930 | SIR2 family protein | |||
| 23940 | 38 aa hypothetical protein | |||
| 23950 | S | S.Cte37ORF23170P (100% identity) | S.Cte1001ORF23970P | |
| 23960 | four helix bundle protein | |||
| 23970 | M | M.Cte37ORF23170P (100% identity) | M.Cte1001ORF23970P | |
| 23980 | glutamine--fructose-6-phosphate transaminase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12390 | type II CRISPR RNA-guided endonuclease Cas9 | |||
| 12400 | RM | Cte41ORF12150P (100% identity) | Cte1001ORF12400P | |
| 12410 | Fic family protein | |||
| 18170 | 115 aa hypothetical protein | |||
| ??? | M | M.Ctecb2ORF8940P (100% identity) | M.Cte1001ORF18180P | |
| 18200 | type II toxin-antitoxin system death-on-curing | |||
| 21000 | spermidine synthase | |||
| 21010 | M | M.Cte41ORF21820P (100% identity) | CAAAAAR | M.Cte1001ORF21010P |
| 21020 | delta-lactam-biosynthetic de-N-acetylase | |||
| plasmid pKHSU-154301-001 | ||||
| 26370 | acyltransferase | |||
| 26380 | M | M.Cte37ORF10130P (100% identity) | M.Cte1001ORF26380P | |
| 26390 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4620 | L,D-transpeptidase family protein | |||
| 4630 | R | Cte41ORF4540P (100% identity) | Cte1001ORF4630P | |
| 4640 | nucleoside triphosphate pyrophosphohydrolase | |||
| 5050 | 70 aa hypothetical protein | |||
| 5060 | R | Cte37GmrSDP (100% identity) | Cte1001GmrSDP | |
| 5070 | 499 aa hypothetical protein | |||