Novosphingobium olei DW067 |
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Putative Novosphingobium olei DW067 RM systems
Ref: Ishizawa,H. et al. Microbes Environ. 35 (2020)
REBASE ref # 37936
Complete sequence: 3,986,061 bp
GenBank #: AP029021
REBASE acronym: NolDW067
Org_num: 73454
All begin NSDW_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5050 | nucleoside 2-deoxyribosyltransferase | |||
| 5060 | S | S1.Pph9175ORF14175P (21% identity) | S.NolDW067ORF5070P | |
| 5070 | M | M.SspM15ORF10540P (87% identity) | M.NolDW067ORF5070P | |
| 5080 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4550 | DUF5681 domain-containing protein | |||
| 4560 | M | M.Sgi16858ORFDP (79% identity) | M.NolDW067ORF4560P | |
| 4570 | helix-turn-helix domain-containing protein | |||
| 5140 | site-specific integrase | |||
| 5150 | R | SmiDMF3ORF19830P (90% identity) | NolDW067ORF5150P | |
| 5160 | HipA domain-containing protein | |||
| 5500 | helix-turn-helix transcriptional regulator | |||
| 5510 | R | CspD39ORFAP (76% identity) | NolDW067ORF5510P | |
| 5520 | conjugative relaxase | |||
| 13760 | ribonuclease HII | |||
| 13770 | M | M.SspRSPHII (71% identity) | M.NolDW067ORF13770P | |
| 13780 | 105 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5460 | TM0106 family RecB-like putative nuclease | |||
| 5470 | M | M.SheMHORFBP (77% identity) | M.NolDW067ORF5470P | |
| 5480 | R | SheMHORFBP (93% identity) | NolDW067ORF5470P | |
| 5490 | 59 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4990 | 459 aa hypothetical protein | |||
| 5000 | R | SspOPL5McrCP (78% identity) | NolDW067McrCP | |
| 5010 | 47 aa hypothetical protein | |||
| 5020 | R | MspN3McrBP (27% identity) | NolDW067McrBP | |
| 5030 | transposase | |||