Campylobacter species CFSAN122719 |
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Putative Campylobacter species CFSAN122719 RM systems
Ref: Bravo,V. et al. unpublished
REBASE ref # 37882
Complete sequence: 1,706,286 bp
GenBank #: CP116955
REBASE acronym: Csp9
Org_num: 73067
All begin OT343_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7875 | NAD(P)-dependent alcohol dehydrogenase | |||
| 7880 | R | Csp93259ORF7950P (100% identity) | GCANNNNNRTTA | Csp9ORF7895P |
| 7885 | ATP-binding protein | |||
| 7890 | S | S.Csp93259ORF7950P (100% identity) | GCANNNNNRTTA | S.Csp9ORF7895P |
| 7895 | M | M.Csp93238ORF8125P (100% identity) | GCANNNNNRTTA | M.Csp9ORF7895P |
| 7900 | SAM-dependent DNA methyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 170 | PD-(D/E)XK nuclease family protein | |||
| 175 | RM | Cje949ORF180P (99% identity) | CCYGA | Csp9ORF175P |
| 180 | P-loop NTPase fold protein | |||
| 1030 | translation initiation factor IF-3 | |||
| 1035 | M | M.Csp93260ORF1040P (100% identity) | RAATTY | M.Csp9ORF1035P |
| 1040 | S6 family peptidase | |||
| 1210 | dihydroorotase | |||
| 1215 | RM | Cje65403ORF8455P (100% identity) | Csp9ORF1215P | |
| 1220 | class I SAM-dependent methyltransferase | |||
| 3310 | acetate kinase | |||
| 3315 | RM | Cje65347ORF4655P (100% identity) | GKAAYC | Csp9ORF3315P |
| 3320 | 163 aa hypothetical protein | |||
| 5465 | NAD-dependent deacetylase | |||
| 5470 | RM | CjesR14ORFFP (99% identity) | GAGNNNNNGT | Csp9ORF5470P |
| 5475 | endonuclease MutS2 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 680 | ribosome maturation factor RimP | |||
| 685 | R | Csp93238McrBP (99% identity) | Csp9McrBP | |
| 690 | R | Csp93238McrCP (100% identity) | Csp9McrCP | |
| 695 | metal ABC transporter permease | |||