Campylobacter species CFSAN122778 |
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Putative Campylobacter species CFSAN122778 RM systems
Ref: Bravo,V. et al. unpublished
REBASE ref # 37882
Complete sequence: 1,713,632 bp
GenBank #: CP116951
REBASE acronym: Csp78
Org_num: 73069
All begin OT625_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8090 | NAD(P)-dependent alcohol dehydrogenase | |||
| 8095 | R | Csp93246ORF7905P (100% identity) | CYAANNNNNNNNTAYC | Csp78ORF8120P |
| 8100 | ATP-binding protein | |||
| 8105 | RloB family protein | |||
| 8110 | S | S.CjeP4549ORF8015P (99% identity) | CYAANNNNNNNNTAYC | S.Csp78ORF8120P |
| 8115 | Fic family protein | |||
| 8120 | M | M.Csp93257ORF8150P (100% identity) | CYAANNNNNNNNTAYC | M.Csp78ORF8120P |
| 8125 | carboxymuconolactone decarboxylase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 175 | PD-(D/E)XK nuclease family protein | |||
| 180 | RM | Csp93246ORF180P (100% identity) | Csp78ORF180P | |
| 185 | ATP-binding protein | |||
| 1040 | translation initiation factor IF-3 | |||
| 1045 | M | M.Csp93259ORF1035P (100% identity) | RAATTY | M.Csp78ORF1045P |
| 1050 | S6 family peptidase | |||
| 3350 | acetate kinase | |||
| 3355 | RM | Csp93246ORF3400P (100% identity) | GKAAGC | Csp78ORF3355P |
| 3360 | 163 aa hypothetical protein | |||
| 5850 | phage virion morphogenesis protein | |||
| 5855 | M | M.Csp93257ORF3680P (100% identity) | M.Csp78ORF5855P | |
| 5860 | 95 aa hypothetical protein | |||
| 7130 | phage tail protein | |||
| 7135 | M | M.CjeST19dORFEP (100% identity) | M.Csp78ORF7135P | |
| 7140 | 95 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 695 | ribosome maturation factor RimP | |||
| 700 | R | Csp93257McrBP (100% identity) | Csp78McrBP | |
| 705 | R | Csp93257McrCP (100% identity) | Csp78McrCP | |
| 710 | metal ABC transporter permease | |||