Coraliomargarita species J2-16 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Coraliomargarita species J2-16 RM systems
Ref: Lee,J.K. et al. unpublished
REBASE ref # 37884
Complete sequence: 5,384,071 bp
GenBank #: CP138858
REBASE acronym: CspJ216
Org_num: 73075
All begin SH580_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4495 | DEAD/DEAH box helicase | |||
| 4500 | R | MsaSMR5ORF337P (65% identity) | CspJ216ORF4510P | |
| 4505 | DNA binding domain-containing protein | |||
| 4510 | M | M.CbaCB1ORF6540P (68% identity) | M.CspJ216ORF4510P | |
| 4515 | S | S.Vra23674ORFDP (19% identity) | S.CspJ216ORF4510P | |
| 4520 | 165 aa hypothetical protein | |||
| 7340 | 279 aa hypothetical protein | |||
| 7345 | R | LspHRD7ORF5550P (46% identity) | CspJ216ORF7385P | |
| 7350 | 60 aa hypothetical protein | |||
| 7355 | Abi family protein | |||
| 7360 | 227 aa hypothetical protein | |||
| 7365 | 438 aa hypothetical protein | |||
| 7370 | 637 aa hypothetical protein | |||
| 7375 | S | S.SmeM342ORF6160P (25% identity) | S.CspJ216ORF7385P | |
| 7380 | NERD domain-containing protein | |||
| 7385 | M | M.CspJ216ORF7385BP (17% identity) | M.CspJ216ORF7385AP | |
| 7390 | RES family NAD+ phosphorylase | |||
| 7395 | antitoxin Xre/MbcA/ParS toxin-binding | |||
| 7400 | M | M.LspHIORF34770P (52% identity) | M.CspJ216ORF7385BP | |
| 7405 | 142 aa hypothetical protein | |||
| 8585 | SprT family zinc-dependent metalloprotease | |||
| 8590 | R | GsuPLORF8925P (76% identity) | CspJ216ORF8625P | |
| 8595 | ATP-binding protein | |||
| 8600 | RhuM family protein | |||
| 8605 | AAA family ATPase | |||
| 8610 | S | S.SspAR647ORF7865P (34% identity) | S2.CspJ216ORF8625P | |
| 8615 | 114 aa hypothetical protein | |||
| 8620 | KilA-N domain-containing protein | |||
| 8625 | M | M.GsuPLORF8925P (81% identity) | M.CspJ216ORF8625P | |
| 8630 | S | S2.GsuPLORF8925P (52% identity) | S1.CspJ216ORF8625P | |
| 8635 | histidine--tRNA ligase | |||
| 13205 | SprT family zinc-dependent metalloprotease | |||
| 13210 | R | GurRORF4043P (74% identity) | CspJ216ORF13245P | |
| 13215 | 464 aa hypothetical protein | |||
| 13220 | 70 aa hypothetical protein | |||
| 13225 | DUF262 domain-containing HNH endonuclease family | |||
| 13230 | 783 aa hypothetical protein | |||
| 13235 | S | S.GurRORF4043P (29% identity) | S2.CspJ216ORF13245P | |
| 13240 | S | S.GhaSAP1ORF18955P (30% identity) | S1.CspJ216ORF13245P | |
| 13245 | M | M.SspERG5ORFBP (56% identity) | M.CspJ216ORF13245P | |
| 13250 | 400 aa hypothetical protein | |||
| 17535 | YiiX/YebB-like N1pC/P60 family cysteine | |||
| 17540 | M | M.Psp326ORFEP (70% identity) | M.CspJ216ORF17540P | |
| 17545 | four helix bundle protein | |||
| 17550 | virulence RhuM family protein | |||
| 17555 | S | S.MkoLM6ORF4387P (47% identity) | S1.CspJ216ORF17540P | |
| 17560 | DUF1828 domain-containing protein | |||
| 17565 | 55 aa hypothetical protein | |||
| 17570 | AAA family ATPase | |||
| 17575 | DNA adenine methylase | |||
| 17580 | 418 aa hypothetical protein | |||
| 17585 | S | S.Nsp212ORF3162P (37% identity) | S2.CspJ216ORF17540P | |
| 17590 | KilA-N domain-containing protein | |||
| 17595 | R | AaeZSORF7105P (67% identity) | CspJ216ORF17540P | |
| 17600 | 151 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10515 | HEPN domain-containing protein | |||
| 10520 | RM | Fsp2469ORFAP (48% identity) | CspJ216ORF10520P | |
| 10525 | 189 aa hypothetical protein | |||
| 16550 | M | M.Aba813ORF8925P (23% identity) | M1.CspJ216ORF16550P | |
| 16555 | M | M.Aba813ORF8925P (27% identity) | M2.CspJ216ORF16550P | |
| 16560 | DUF2288 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10300 | (deoxy)nucleoside triphosphate | |||
| 10305 | R | Tvi198ORF4104P (69% identity) | CspJ216ORF10305P | |
| 10310 | DUF2726 domain-containing protein | |||