Shigella flexneri 1b SF-018-002 |
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Putative Shigella flexneri 1b SF-018-002 RM systems
Ref: Neemuchwala,A. et al. Sci Rep 13 (1), 16582 (2023)
REBASE ref # 37924
| Sequence length: | GenBank #: | |
| Chromosome: | 4,495,661 bp | CP127081 |
| plasmid psflex002: | 76,772 bp | CP127083 |
REBASE acronym: Sfl02
Org_num: 73244
All begin QQS68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19580 | IS3-like element IS2 family transposase | |||
| 19585 | R | SflTORF4636P (100% identity) | GTANNNNNNNNGTCY | Sfl02ORF19590P |
| 19590 | M | M.SspS13ORF3945P (100% identity) | GTANNNNNNNNGTCY | M.Sfl02ORF19590P |
| 19595 | S | S.SflPE577ORF23095P (100% identity) | GTANNNNNNNNGTCY | S.Sfl02ORF19590P |
| 19600 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.SflTDamP (100% identity) | GATC | M.Sfl02DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2360 | DUF2556 family protein | |||
| 2365 | M | M.SflTORF3517P (100% identity) | ATGCAT | M.Sfl02ORF2365P |
| 2370 | DNA-binding transcriptional regulator Fis | |||
| 8790 | phosphohydrolase | |||
| 8795 | M | M.SflTDcmP (100% identity) | CCWGG | M.Sfl02DcmP |
| 8800 | V | V.SflTDcmP (100% identity) | CCWGG | V.Sfl02DcmP |
| 8805 | drug/metabolite exporter YedA | |||
| plasmid psflex002 | ||||
| 24170 | 103 aa hypothetical protein | |||
| 24175 | M | M.Sso3885ORF23215P (100% identity) | SAY | M.Sfl02ORF24175P |
| 24180 | 73 aa hypothetical protein | |||