Neisseria gonorrhoeae TH1713 |
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Putative Neisseria gonorrhoeae TH1713 RM systems
Ref: Golparian,D. unpublished
REBASE ref # 34767
Complete sequence: 2,228,256 bp
GenBank #: CP138342
REBASE acronym: Ngo3
Org_num: 73006
All begin SE147_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2065 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2070 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNGTC | M.Ngo3ORF2070P |
| 2075 | DNA damage-inducible protein D | |||
| 2080 | S | S.NgoWMII (100% identity) | GCANNNNNNGTC | S.Ngo3ORF2070P |
| 2085 | R | Ngo8ORF2075P (100% identity) | GCANNNNNNGTC | Ngo3ORF2070P |
| 2090 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3575 | replication-associated recombination protein A | |||
| 3580 | R | NgoWLIP (99% identity) | GAGNNNNNTAC | Ngo3ORF3605P |
| 3585 | hydroxyacid dehydrogenase | |||
| 3590 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo3ORF3605P |
| 3595 | 186 aa hypothetical protein | |||
| 3600 | 279 aa hypothetical protein | |||
| 3605 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo3ORF3605P |
| 3610 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo3ORF45P |
| 40 | restriction endonuclease | |||
| 45 | M | M.Ngo8ORF45P (100% identity) | GATC | M.Ngo3ORF45P |
| 50 | 184 aa hypothetical protein | |||
| 1535 | phenylalanine--tRNA ligase subunit alpha | |||
| 1540 | V | V.NgoWSORF391P (100% identity) | V.Ngo3ORF1545P | |
| ??? | M | M.Ngo8ORF1545P (100% identity) | M.Ngo3ORF1545P | |
| 1555 | R | Npo18661ORFHP (100% identity) | CCGG | Ngo3ORF1545P |
| 1560 | phenylalanine--tRNA ligase subunit beta | |||
| 1865 | uroporphyrinogen decarboxylase | |||
| 1870 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo3ORF1880P | |
| 1875 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo3ORF1880P |
| 1880 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo3ORF1880P |
| 1885 | DNA repair protein RadA | |||
| 3460 | 3-isopropylmalate dehydrogenase | |||
| 3465 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo3ORF3470P |
| 3470 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo3ORF3470P |
| 3475 | 3-isopropylmalate dehydratase small subunit | |||
| 4745 | anthranilate synthase component I | |||
| 4750 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo3ORF4750P |
| 4755 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo3ORF4750P |
| 4760 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6105 | replication initiation factor domain-containing | |||
| 6110 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo3ORF6125P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo3ORF6125P |
| ??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.Ngo3ORF6125P |
| 6135 | 48 aa hypothetical protein | |||
| 6320 | excinuclease ABC subunit UvrA | |||
| 6325 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo3ORF6330P |
| 6330 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo3ORF6330P |
| 6335 | 62 aa hypothetical protein | |||
| 9605 | FUSC family protein | |||
| 9610 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo3ORF9615P |
| 9615 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo3ORF9615P |
| 9620 | ribosome recycling factor | |||
| 10145 | 58 aa hypothetical protein | |||
| 10150 | R | NgoPID18ORF1848P (100% identity) | GGTGA | Ngo3ORF10155P |
| 10155 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo3ORF10155P |
| 10160 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo3ORF10155P |
| 10165 | Tex family protein | |||
| 10720 | GTPase ObgE | |||
| 10725 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.Ngo3ORF10725P |
| 10730 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo3ORF10725P |
| 10735 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2810 | peptidylprolyl isomerase | |||
| 2815 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo3ORF2815P | |
| 2820 | R | Ngos1291ORF8455P (100% identity) | Ngo3ORF2815P | |
| 2825 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3275 | alpha-hydroxy acid oxidase | |||
| 3280 | R | NgoCT602ORF3210P (100% identity) | GCAGA | Ngo3ORF3285P |
| ??? | M | M.NgoJH7ORFKP (100% identity) | GCAGA | M.Ngo3ORF3285P |
| 3295 | tRNA pseudouridine(55) synthase TruB | |||