Vibrio cholerae VN152 |
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Putative Vibrio cholerae VN152 RM systems
Ref: Nakayama,T. et al. unpublished
REBASE ref # 34973
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,873,080 bp | AP028804 |
| plasmid pVN152: | 182,635 bp | AP028805 |
REBASE acronym: VchVN152
Org_num: 72963
All begin VNVC001_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 9690 | DEAD/DEAH box helicase | |||
| 9700 | R | VmiY4ORF12785P (99% identity) | VchVN152ORF9710P | |
| 9710 | M | M.Vsp586ORF1971P (97% identity) | M.VchVN152ORF9710P | |
| 9720 | S | S.Vsp586ORF1971P (64% identity) | S.VchVN152ORF9710P | |
| 9730 | carboxypeptidase M32 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4560 | 170 aa hypothetical protein | |||
| 4570 | R | VchW10GDptFP (100% identity) | VchVN152DptFP | |
| 4580 | 449 aa hypothetical protein | |||
| 4570 | 532 aa hypothetical protein | |||
| 4580 | R | VchPS4DptGP (99% identity) | VchVN152DptGP | |
| 4590 | 1675 aa hypothetical protein | |||
| 4580 | 449 aa hypothetical protein | |||
| 4590 | R | VchW7GDptHP (99% identity) | VchVN152DptHP | |
| 4600 | 549 aa hypothetical protein | |||
| 4610 | 151 aa hypothetical protein | |||
| 4620 | M | M.VchW10GDndEP (95% identity) | M.VchVN152DndEP | |
| 4630 | DNA sulfur modification protein DndD | |||
| 4620 | DNA sulfur modification protein DndE | |||
| 4630 | M | M.VchPS4DndDP (96% identity) | M.VchVN152DndDP | |
| 4640 | DNA phosphorothioation system sulfurtransferase | |||
| 4630 | DNA sulfur modification protein DndD | |||
| 4640 | M | M.Vch5DndCP (99% identity) | M.VchVN152DndCP | |
| 4650 | DNA sulfur modification protein DndB | |||
| 4640 | DNA phosphorothioation system sulfurtransferase | |||
| 4650 | M | M.VchW7GDndBP (100% identity) | M.VchVN152DndBP | |
| 4660 | cysteine desulfurase DndA | |||
| 4650 | DNA sulfur modification protein DndB | |||
| 4660 | M | M.VchW7GDndAP (99% identity) | M.VchVN152DndAP | |
| 4670 | 267 aa hypothetical protein | |||
| plasmid pVN152 | ||||
| 25750 | 143 aa hypothetical protein | |||
| 25760 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.VchVN152ORF25760P |
| 25770 | 100 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4660 | cysteine desulfurase DndA | |||
| 4670 | R | Vvu3MrrP (99% identity) | VchVN152MrrP | |
| 4680 | 677 aa hypothetical protein | |||