Pseudomonas aeruginosa 2020CK-00195 |
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Putative Pseudomonas aeruginosa 2020CK-00195 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
Complete sequence: 7,207,768 bp
GenBank #: CP137912
REBASE acronym: Pae195
Org_num: 72835
All begin L4660_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 410 | site-specific integrase | |||
| 415 | M | M.PaePA7II (100% identity) | AGANNNNNNNNTCAA | M.Pae195ORF415P |
| 420 | S | S.PaePA7II (100% identity) | AGANNNNNNNNTCAA | S.Pae195ORF415P |
| 425 | R | PaePA7IIP (100% identity) | AGANNNNNNNNTCAA | Pae195ORF415P |
| 430 | C | C.PspBYT5ORF19420P (100% identity) | C.Pae195ORF415P | |
| 435 | 196 aa hypothetical protein | |||
| 1835 | sigma 54-interacting transcriptional regulator | |||
| 1840 | R | PaeMF1ORF1540P (99% identity) | Pae195ORF1850P | |
| 1845 | DNA recombination protein RmuC | |||
| 1850 | M | M.Pfl13852ORFAP (100% identity) | M.Pae195ORF1850P | |
| 1855 | S | S.Pfl13852ORFAP (100% identity) | S.Pae195ORF1850P | |
| 1860 | 48 aa hypothetical protein | |||
| 12355 | DNA-processing protein DprA | |||
| 12360 | M | M1.Pae973ORF12590P (100% identity) | M1.Pae195ORF12360P | |
| 12365 | M | M2.Pae973ORF12590P (100% identity) | M2.Pae195ORF12360P | |
| 12370 | S | S.Pae973ORF12590P (100% identity) | S.Pae195ORF12360P | |
| 12375 | R | Pae973ORF12590P (100% identity) | Pae195ORF12360P | |
| 12380 | AAA family ATPase | |||
| 23295 | IS3 family transposase | |||
| 23300 | R | PaeMF1ORF24740P (100% identity) | Pae195ORF23320P | |
| 23305 | 235 aa hypothetical protein | |||
| 23310 | AAA family ATPase | |||
| 23315 | S | S.PaeMF1ORF24740P (100% identity) | S.Pae195ORF23320P | |
| 23320 | M | M.PaeMF1ORF24740P (100% identity) | M.Pae195ORF23320P | |
| 23325 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1640 | 94 aa hypothetical protein | |||
| 1645 | M | M.PaesS1ORF1335P (100% identity) | M.Pae195ORF1645P | |
| 1650 | V | V.PaesS1ORF1335P (100% identity) | V.Pae195ORF1645P | |
| 1655 | DISARM system phospholipase D-like protein DrmC | |||
| 1665 | DISARM system helicase DrmA | |||
| 1670 | RM | PaesS1ORF1360P (100% identity) | Pae195ORF1670P | |
| 1675 | DISARM system SNF2-like helicase DrmD | |||
| 11755 | 213 aa hypothetical protein | |||
| 11760 | M | M.PaeYTSY4ORF6725P (100% identity) | M.Pae195ORF11760P | |
| 11765 | 159 aa hypothetical protein | |||
| 22070 | nucleoid-associated protein YejK | |||
| 22075 | M | M.PspHORFAP (100% identity) | M.Pae195ORF22075P | |
| 22080 | Arc family DNA-binding protein | |||
| 25480 | nucleoid-associated protein YejK | |||
| 25485 | M | M.PspAK6UORFCP (100% identity) | M.Pae195ORF25485P | |
| 25490 | Arc family DNA-binding protein | |||
| 29400 | 83 aa hypothetical protein | |||
| 29405 | M | M.PaeTBCFORFBP (89% identity) | M.Pae195ORF29405P | |
| 29410 | phosphoadenosine phosphosulfate reductase family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12375 | HsdR family type I site-specific | |||
| 12380 | R | Pae973McrBP (100% identity) | Pae195McrBP | |
| 12385 | R | Pae973McrCP (100% identity) | Pae195McrCP | |
| 12390 | 166 aa hypothetical protein | |||