Pseudomonas aeruginosa 2021CK-01104 |
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Putative Pseudomonas aeruginosa 2021CK-01104 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
Complete sequence: 7,265,861 bp
GenBank #: CP137913
REBASE acronym: Pae1104
Org_num: 72840
All begin L4V68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 410 | site-specific integrase | |||
| 415 | M | M.PaePA7II (100% identity) | AGANNNNNNNNTCAA | M.Pae1104ORF415P |
| 420 | S | S.PaePA7II (100% identity) | AGANNNNNNNNTCAA | S.Pae1104ORF415P |
| 425 | R | PaePA7IIP (100% identity) | AGANNNNNNNNTCAA | Pae1104ORF415P |
| 430 | C | C.PspBYT5ORF19420P (100% identity) | C.Pae1104ORF415P | |
| 435 | 196 aa hypothetical protein | |||
| 1845 | sigma 54-interacting transcriptional regulator | |||
| 1850 | R | PaeMF1ORF1540P (99% identity) | Pae1104ORF1860P | |
| 1855 | DNA recombination protein RmuC | |||
| 1860 | M | M.Pfl13852ORFAP (100% identity) | M.Pae1104ORF1860P | |
| 1865 | S | S.Pfl13852ORFAP (100% identity) | S.Pae1104ORF1860P | |
| 1870 | 48 aa hypothetical protein | |||
| 2175 | peptidase M15 | |||
| 2180 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae1104ORF2190P |
| 2185 | HNH endonuclease signature motif containing | |||
| 2190 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae1104ORF2190P |
| 2195 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae1104ORF2190P |
| 2200 | endonuclease NucS | |||
| 9565 | helix-turn-helix domain-containing protein | |||
| 9570 | M | M.PaeMF1ORF24740P (100% identity) | M.Pae1104ORF9570P | |
| 9575 | S | S.PaeMF1ORF24740P (100% identity) | S.Pae1104ORF9570P | |
| 9580 | AAA family ATPase | |||
| 9585 | 235 aa hypothetical protein | |||
| 9590 | R | PaeMF1ORF24740P (100% identity) | Pae1104ORF9570P | |
| 9595 | IS3 family transposase | |||
| 21930 | AAA family ATPase | |||
| 21935 | R | Pae973ORF12590P (100% identity) | Pae1104ORF21945P | |
| 21940 | S | S.Pae973ORF12590P (100% identity) | S.Pae1104ORF21945P | |
| 21945 | M | M2.Pae973ORF12590P (100% identity) | M2.Pae1104ORF21945P | |
| 21950 | M | M1.Pae973ORF12590P (100% identity) | M1.Pae1104ORF21945P | |
| 21955 | DNA-processing protein DprA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1650 | 94 aa hypothetical protein | |||
| 1655 | M | M.PaesS1ORF1335P (100% identity) | M.Pae1104ORF1655P | |
| 1660 | V | V.PaesS1ORF1335P (100% identity) | V.Pae1104ORF1655P | |
| 1665 | DISARM system phospholipase D-like protein DrmC | |||
| 1675 | DISARM system helicase DrmA | |||
| 1680 | RM | PaesS1ORF1360P (100% identity) | Pae1104ORF1680P | |
| 1685 | DISARM system SNF2-like helicase DrmD | |||
| 2965 | phosphoadenosine phosphosulfate reductase family | |||
| 2970 | M | M.PaeTBCFORFBP (89% identity) | M.Pae1104ORF2970P | |
| 2975 | 83 aa hypothetical protein | |||
| 7200 | Arc family DNA-binding protein | |||
| 7205 | M | M.PaepUM505ORFAP (100% identity) | M.Pae1104ORF7205P | |
| 7210 | nucleoid-associated protein YejK | |||
| 15405 | 45 aa hypothetical protein | |||
| ??? | M | M.PaeMF1ORFAP (100% identity) | M.Pae1104ORFAP | |
| 15415 | 99 aa hypothetical protein | |||
| 22545 | 159 aa hypothetical protein | |||
| 22550 | M | M.PaeYTSY4ORF6725P (100% identity) | M.Pae1104ORF22550P | |
| 22555 | 213 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21920 | 166 aa hypothetical protein | |||
| 21925 | R | Pae973McrCP (100% identity) | Pae1104McrCP | |
| 21930 | R | Pae973McrBP (100% identity) | Pae1104McrBP | |
| 21935 | HsdR family type I site-specific | |||