Escherichia coli Jtgc-02-2-Tmex |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli Jtgc-02-2-Tmex RM systems
Ref: Zhang,M. and Hao,Y. unpublished
REBASE ref # 37789
| Sequence length: | GenBank #: | |
| Chromosome: | 4,600,459 bp | CP132223 |
| plasmid pJtgc-02-p1: | 165,182 bp | CP132224 |
REBASE acronym: Eco22T
Org_num: 72619
All begin Q8R68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19130 | adenine/cytosine-specific restriction | |||
| 19135 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco22TORF19140P |
| 19140 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco22TORF19140P |
| 19145 | S | S.EcoVir2ORF19035P (100% identity) | AACNNNNNNGTGC | S.Eco22TORF19140P |
| 19150 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1665 | cell division protein DamX | |||
| 1670 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco22TDamP |
| 1675 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco22TORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 8830 | phosphohydrolase | |||
| 8835 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco22TDcmP |
| 8840 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco22TDcmP |
| 8845 | drug/metabolite exporter YedA | |||
| plasmid pJtgc-02-p1 | ||||
| 23405 | 73 aa hypothetical protein | |||
| 23410 | M | M.SmaQC11ORF52800P (100% identity) | M.Eco22TORF23410P | |
| 23415 | 56 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13055 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13060 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco22TORF13060P |
| 13065 | site-specific DNA recombinase | |||
| 19125 | GTPase | |||
| 19130 | R | SenHNK130MrrP (100% identity) | Eco22TMrrP | |
| 19135 | type I restriction-modification system | |||