Sediminicoccus rosea R-30 |
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Putative Sediminicoccus rosea R-30 RM systems
Ref: Tomasch,J. et al. unpublished
REBASE ref # 37834
| Sequence length: | GenBank #: | |
| Chromosome: | 5,121,490 bp | CP137852 |
| plasmid p17: | 16,871 bp | CP137853 |
REBASE acronym: SroR30
Org_num: 72892
All begin R9Z33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8585 | helix-turn-helix domain-containing protein | |||
| 8590 | S | S.Rsp546ORFCP (65% identity) | S.SroR30ORF8605P | |
| 8595 | AAA family ATPase | |||
| 8600 | 295 aa hypothetical protein | |||
| 8605 | M | M.Rsp546ORFCP (77% identity) | M.SroR30ORF8605P | |
| 8610 | 56 aa hypothetical protein | |||
| 13415 | phospholipase D family protein | |||
| 13420 | R | CseCBR1ORF5200P (82% identity) | SroR30ORF13430P | |
| 13425 | S | S.CseCBR1ORF5200P (45% identity) | S.SroR30ORF13430P | |
| 13430 | M | M.AspTS1ORF12265P (83% identity) | M.SroR30ORF13430P | |
| 13435 | N-6 DNA methylase | |||
| plasmid p17 | ||||
| 24695 | AAA family ATPase | |||
| 24700 | M | M.Tmo65ORF360P (93% identity) | M.SroR30ORF24700P | |
| 24705 | recombinase family protein | |||
| 24710 | DUF3768 domain-containing protein | |||
| 24715 | type IV secretory system conjugative DNA | |||
| 24720 | MobA/MobL family protein | |||
| 24725 | ParA family protein | |||
| 24730 | ribbon-helix-helix domain-containing protein | |||
| 24735 | replication initiator protein A | |||
| 24740 | type II toxin-antitoxin system RelE/ParE family | |||
| 24745 | HigA family addiction module antitoxin | |||
| 24685 | R | BspANAM02ORF8160P (92% identity) | SroR30ORF24700P | |
| 24690 | S | S.Rca37b4ORF12095P (60% identity) | S.SroR30ORF24700P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3630 | IS3 family transposase | |||
| 3635 | RM | EadL18ORFAP (31% identity) | SroR30ORF3635P | |
| 3640 | helicase-related protein | |||
| 5890 | 78 aa hypothetical protein | |||
| 5895 | M | M1.RmuTT14ORF10805P (97% identity) | M1.SroR30ORF5895P | |
| 5900 | M | M2.Rmu4ORF1345P (88% identity) | M2.SroR30ORF5895P | |
| 5905 | IS3 family transposase | |||
| 6165 | 75 aa hypothetical protein | |||
| 6170 | M | M2.SroR30ORF13555P (96% identity) | M1.SroR30ORF6170P | |
| 6175 | M | M2.Rmu4ORF1345P (95% identity) | M2.SroR30ORF6170P | |
| 6180 | DUF1778 domain-containing protein | |||
| 13550 | HNH endonuclease | |||
| 13555 | M | M2.RmuPGORF4845P (93% identity) | M1.SroR30ORF13555P | |
| 13560 | M | M1.SroR30ORF6170P (96% identity) | M2.SroR30ORF13555P | |
| 13565 | 78 aa hypothetical protein | |||
| 16115 | DUF6456 domain-containing protein | |||
| 16120 | M | M1.SroR30ORF16445P (96% identity) | M1.SroR30ORF16120P | |
| 16125 | M | M2.SroR30ORF16445P (91% identity) | M2.SroR30ORF16120P | |
| 16130 | DUF3489 domain-containing protein | |||
| 16440 | 184 aa hypothetical protein | |||
| 16445 | M | M1.SroR30ORF16120P (96% identity) | M1.SroR30ORF16445P | |
| 16450 | M | M2.SroR30ORF16120P (91% identity) | M2.SroR30ORF16445P | |
| 16455 | alpha/beta fold hydrolase | |||
| 16720 | 930 aa hypothetical protein | |||
| 16725 | M | M.SspC32ORF5145P (60% identity) | M.SroR30ORF16725P | |
| 16730 | 142 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16000 | response regulator | |||
| 16010 | M | M.PamNM002ORF9855P (60% identity) | M.SroR30ORF16010P | |
| 16015 | R | CsaHT4ORFKP (82% identity) | SroR30ORF16010P | |
| 16020 | S8 family peptidase | |||
| 16330 | LysR family transcriptional regulator | |||
| 16335 | M | M.EspMSP2ORF2010P (63% identity) | M.SroR30ORF16335P | |
| 16340 | R | EspMSP2ORF2010P (82% identity) | SroR30ORF16335P | |
| 16345 | 324 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13405 | 76 aa hypothetical protein | |||
| 13410 | R | MspB7MrrP (77% identity) | SroR30MrrP | |
| 13415 | phospholipase D family protein | |||