Vibrio parahaemolyticus M0904 |
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Putative Vibrio parahaemolyticus M0904 RM systems
Ref: Vereecke,N. et al. unpublished
REBASE ref # 37852
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,478,099 bp | CP133891 |
| chromosome 2: | 1,908,426 bp | CP133892 |
| plasmid pVPM09041: | 73,424 bp | CP133893 |
| plasmid pVPM09043: | 73,449 bp | CP133895 |
REBASE acronym: VpaM0904
Org_num: 72966
All begin RHS38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3430 | WYL domain-containing protein | |||
| 3435 | M | M.Csp696ORF21720P (99% identity) | M.VpaM0904ORF3435P | |
| 3440 | S | S.Kpn392gORF5321P (84% identity) | S.VpaM0904ORF3435P | |
| 3445 | anticodon nuclease | |||
| 3450 | R | ValYM4ORF23620P (99% identity) | VpaM0904ORF3435P | |
| 3455 | SIR2 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 7275 | phage tail tape measure protein | |||
| 7280 | M | M.VpaM0904ORF22015P (100% identity) | M.VpaM0904ORF7280P | |
| 7285 | 90 aa hypothetical protein | |||
| 16170 | BREX-1 system phosphatase PglZ type A | |||
| 16175 | RM | M.EfeV (75% identity) | VpaM0904ORF16175P | |
| 16180 | 252 aa hypothetical protein | |||
| chromosome 2 | ||||
| 22010 | 90 aa hypothetical protein | |||
| 22015 | M | M.VpaM0904ORF7280P (100% identity) | M.VpaM0904ORF22015P | |
| 22020 | phage tail tape measure protein | |||
| plasmid pVPM09041 | ||||
| 25190 | integrase | |||
| 25195 | M | M.VpaVP17ORF25320P (100% identity) | M.VpaM0904ORF25195P | |
| 25200 | IS5-like element ISVa2 family transposase | |||
| plasmid pVPM09043 | ||||
| 25495 | integrase | |||
| 25500 | M | M.VpaVP17ORF25320P (100% identity) | M.VpaM0904ORF25500P | |
| 25505 | IS5-like element ISVa2 family transposase | |||