Paenibacillus polymyxa PJH16 |
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Putative Paenibacillus polymyxa PJH16 RM systems
Ref: Yang,F. and Jiang,H. unpublished
REBASE ref # 37272
Complete sequence: 5,746,138 bp
GenBank #: CP137742
REBASE acronym: PpoPJH16
Org_num: 72779
All begin RQP19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4335 | type II toxin-antitoxin system Phd/YefM family | |||
| 4340 | M | M.PpoR313ORF1866P (99% identity) | M2.PpoPJH16ORF4340P | |
| 4345 | type II toxin-antitoxin system RelE/ParE family | |||
| 4350 | S | S1.PpoSF05ORF4800P (96% identity) | S1.PpoPJH16ORF4340P | |
| 4355 | R | PpoHY962ORF932P (100% identity) | PpoPJH16ORF4340P | |
| 4360 | RhuM family protein | |||
| 4365 | S | S.PpoHY962ORF932P (100% identity) | S2.PpoPJH16ORF4340P | |
| 4370 | M | M.PpoHY962ORF932P (100% identity) | M1.PpoPJH16ORF4340P | |
| 4375 | tRNA-dihydrouridine synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24850 | helix-turn-helix transcriptional regulator | |||
| 24855 | M | M.PspRC343DndBP (83% identity) | M.PpoPJH16DndBP | |
| 24860 | DNA phosphorothioation system sulfurtransferase | |||
| 24855 | DNA sulfur modification protein DndB | |||
| 24860 | M | M.PspS25DndCP (84% identity) | M.PpoPJH16DndCP | |
| 24865 | DNA sulfur modification protein DndD | |||
| 24860 | DNA phosphorothioation system sulfurtransferase | |||
| 24865 | M | M.Psp82DndDP (56% identity) | M.PpoPJH16DndDP | |
| 24870 | DndE family protein | |||
| 24865 | DNA sulfur modification protein DndD | |||
| 24870 | M | M.Bca3DndEP (55% identity) | M.PpoPJH16DndEP | |
| 24875 | aminotransferase class V-fold PLP-dependent | |||
| 24870 | DndE family protein | |||
| 24875 | M | M.Psp334DndAP (72% identity) | M.PpoPJH16DndAP | |
| 24880 | IS30 family transposase | |||
| 24880 | IS30 family transposase | |||
| 24885 | M | M.Bag6348DndDP (50% identity) | M.PpoPJH16DndD2P | |
| 24890 | 124 aa hypothetical protein | |||
| 24890 | 124 aa hypothetical protein | |||
| 24895 | R | Psp91DptHP (51% identity) | PpoPJH16DptHP | |
| 24900 | DNA phosphorothioation-dependent restriction | |||
| 24895 | DNA phosphorothioation-dependent restriction | |||
| 24900 | R | PasKF4DptGP (32% identity) | PpoPJH16DptGP | |
| 24905 | DNA phosphorothioation-dependent restriction | |||
| 24900 | DNA phosphorothioation-dependent restriction | |||
| 24905 | R | Psp91DptFP (39% identity) | PpoPJH16DptFP | |
| 24910 | 42 aa hypothetical protein | |||