Escherichia coli PSS-12 |
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Putative Escherichia coli PSS-12 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,684,063 bp | AP027697 |
| plasmid pPSS-12_1: | 112,065 bp | AP027698 |
REBASE acronym: EcoPSS12
Org_num: 72664
All begin VEE19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22240 | 388 aa hypothetical protein | |||
| 22250 | M | M.EcoMB52ORF18745P (99% identity) | M.EcoPSS12ORF22250P | |
| 22260 | S | S.Eco3934ORF19585P (68% identity) | S.EcoPSS12ORF22250P | |
| 22270 | R | Eco1919D3ORF20790P (99% identity) | EcoPSS12ORF22250P | |
| 22280 | endoribonuclease SymE | |||
| plasmid pPSS-12_1 | ||||
| 44860 | 73 aa hypothetical protein | |||
| 44870 | M | M.EcoS1632ORFBP (100% identity) | M.EcoPSS12ORF44870P | |
| 44880 | S | S.EcosS142ORF43560P (100% identity) | S.EcoPSS12ORF44870P | |
| 44890 | R | EcoS30ORF24845P (100% identity) | EcoPSS12ORF44870P | |
| 44900 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10 | phage replication protein | |||
| 20 | R | Ecostr10ORF20P (100% identity) | GRGCYC | EcoPSS12ORF40P |
| 30 | C | C.Ecostr10ORF20P (100% identity) | C.EcoPSS12ORF40P | |
| 40 | M | M.Ecostr10ORF20P (90% identity) | GRGCYC | M.EcoPSS12ORF40P |
| 50 | phage portal vertex protein | |||
| 1410 | 231 aa hypothetical protein | |||
| 1420 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoPSS12DcmP |
| 1430 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoPSS12DcmP |
| 1440 | multidrug transporter | |||
| 13260 | replication endonuclease from | |||
| 13270 | M | M.EcoTO6ORF3189P (100% identity) | GATC | M.EcoPSS12ORF13270P |
| 13280 | 75 aa hypothetical protein | |||
| 31200 | cell division protein DamX | |||
| 31210 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPSS12DamP |
| 31220 | ribulose-phosphate 3-epimerase | |||
| 32410 | acrEF/envCD operon repressor | |||
| 32420 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoPSS12ORF32420P |
| 32430 | DNA-binding protein Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22230 | membrane protein | |||
| 22240 | R | Eco3934MrrP (99% identity) | EcoPSS12MrrP | |
| 22250 | DNA methyltransferase | |||