Escherichia coli LR-58-2 |
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Putative Escherichia coli LR-58-2 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 5,179,827 bp | AP027563 |
| plasmid pLR-58-2_1: | 205,671 bp | AP027564 |
REBASE acronym: EcoLR582
Org_num: 72638
All begin VEE04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4830 | endoribonuclease SymE | |||
| 4840 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoLR582ORF4850P |
| 4850 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoLR582ORF4850P |
| 4860 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoLR582ORF4850P |
| 4870 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18370 | protein ninB | |||
| 18380 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoLR582ORF18380P |
| 18390 | protein ninX | |||
| 20080 | 65 aa hypothetical protein | |||
| 20090 | M | M.SsoL4094ORF17545P (100% identity) | A | M.EcoLR582ORF20090P |
| 20100 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 27180 | drug/metabolite exporter YedA | |||
| 27190 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoLR582DcmP |
| 27200 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoLR582DcmP |
| 27210 | phosphohydrolase | |||
| 41190 | DNA-binding protein Fis | |||
| 41200 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoLR582ORF41200P |
| 41210 | acrEF/envCD operon transcriptional regulator | |||
| 42170 | ribulose-phosphate 3-epimerase | |||
| 42180 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoLR582DamP |
| 42190 | cell division protein DamX | |||
| plasmid pLR-58-2_1 | ||||
| 48650 | plasmid stability protein StbA | |||
| 48660 | M | M.Xca80ORFEP (100% identity) | M.EcoLR582ORF48660P | |
| 48670 | 59 aa hypothetical protein | |||
| 50220 | 73 aa hypothetical protein | |||
| 50230 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoLR582ORF50230P |
| 50240 | 308 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4860 | type I restriction-modification system | |||
| 4870 | R | Ssp28760MrrP (100% identity) | EcoLR582MrrP | |
| 4880 | GTPase | |||