Escherichia coli LR-41 |
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Putative Escherichia coli LR-41 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
Complete sequence: 4,637,241 bp
GenBank #: AP027528
REBASE acronym: EcoLR41
Org_num: 72632
All begin VEE32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 36060 | endoribonuclease SymE | |||
| 36070 | S | S.Ecou015ORF19665P (46% identity) | S2.EcoLR41ORF36090P | |
| 36080 | S | S.Efe35473ORFDP (42% identity) | S1.EcoLR41ORF36090P | |
| 36090 | M | M.EcoPSJ12ORF22640P (99% identity) | M.EcoLR41ORF36090P | |
| 36100 | R | Ecou015ORF19665P (100% identity) | EcoLR41ORF36090P | |
| 36110 | 139 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25590 | DNA-binding protein Fis | |||
| 25600 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoLR41ORF25600P |
| 25610 | acrEF/envCD operon repressor | |||
| 26820 | ribulose-phosphate 3-epimerase | |||
| 26830 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoLR41DamP |
| 26840 | cell division protein DamX | |||
| 39420 | 162 aa hypothetical protein | |||
| 39430 | M | M.EcoT761ORF20590P (99% identity) | GATC | M.EcoLR41ORF39430P |
| 39440 | LexA family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11520 | 221 aa hypothetical protein | |||
| 11530 | R | Eco6E9ORF10950P (99% identity) | EcoLR41ORF11540P | |
| 11540 | M | M.Eco6E9ORF10950P (100% identity) | M.EcoLR41ORF11540P | |
| 11550 | DNA helicase II | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 36040 | 49 aa hypothetical protein | |||
| 36050 | R | Ecou015GmrSDP (100% identity) | EcoLR41GmrSDP | |
| 36060 | endoribonuclease SymE | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16730 | 127 aa hypothetical protein | |||
| 16740 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoLR41ORF16740P |
| 16750 | protein ninB | |||