Escherichia coli 15.01CC |
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Putative Escherichia coli 15.01CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,870,618 bp | AP027467 |
| plasmid p15.01CC_2: | 293,632 bp | AP027468 |
REBASE acronym: Eco1CC
Org_num: 72581
All begin VEE68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8510 | 290 aa hypothetical protein | |||
| 8520 | M | M.EcosE1ORFHP (93% identity) | M.Eco1CCORF8520P | |
| 8530 | S | S.EcosE1ORFHP (100% identity) | S.Eco1CCORF8520P | |
| 8540 | R | EcosE1ORFHP (96% identity) | Eco1CCORF8520P | |
| 8550 | 61 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2040 | 53 aa hypothetical protein | |||
| 2050 | M | M.SflLIN8ORF15450P (95% identity) | M.Eco1CCORF2050P | |
| 2060 | 75 aa hypothetical protein | |||
| 13080 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| ??? | R | Ecosa15ORFAP (96% identity) | Eco1CCORF13090P | |
| 13110 | 332 aa hypothetical protein | |||
| 17650 | 329 aa hypothetical protein | |||
| 17660 | M | M.SflFF38ORF15P (100% identity) | GGCC | M.Eco1CCORF17660P |
| 17670 | phage replication protein | |||
| 23910 | cell division protein DamX | |||
| 23920 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1CCDamP |
| 23930 | ribulose-phosphate 3-epimerase | |||
| 24980 | acrEF/envCD operon transcriptional regulator | |||
| 24990 | M | M.Eco803RtORF2540P (100% identity) | ATGCAT | M.Eco1CCORF24990P |
| 25000 | DNA-binding protein Fis | |||
| 33220 | 64 aa hypothetical protein | |||
| 33230 | M | M.EcosE1ORFEP (100% identity) | GATC | M.Eco1CCORF33230P |
| 33240 | transcriptional activator | |||
| 35570 | protein ninB | |||
| 35580 | M | M.Eco01CCORF29250P (100% identity) | M.Eco1CCORF35580P | |
| 35590 | 89 aa hypothetical protein | |||
| plasmid p15.01CC_2 | ||||
| 51930 | 55 aa hypothetical protein | |||
| ??? | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco1CCORF51940P |
| 51960 | nuclease | |||
| 53440 | 85 aa hypothetical protein | |||
| 53450 | M | M.YpsF1ORFDP (84% identity) | M.Eco1CCORF53450P | |
| 53460 | DNA-binding protein | |||
| 53790 | 88 aa hypothetical protein | |||
| 53800 | M | M.YpsF1ORFBP (100% identity) | M.Eco1CCORF53800P | |
| 53810 | 108 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8780 | IS5 family transposase | |||
| 8790 | R | SflN97McrCP (100% identity) | Eco1CCMcrCP | |
| ??? | R | SflN97McrBP (92% identity) | Eco1CCMcrBP | |
| 8820 | 52 aa hypothetical protein | |||