Clostridioides difficile ASS22 |
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Putative Clostridioides difficile ASS22 RM systems
Ref: Blau,K. et al. Microorganisms 11 (10), 2497 (2023)
REBASE ref # 37780
Complete sequence: 4,214,722 bp
GenBank #: CP133826
REBASE acronym: CdiASS22
Org_num: 72545
All begin RHN75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2650 | 115 aa hypothetical protein | |||
| 2655 | M | M.CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | M.CdiASS22ORF2655P |
| 2660 | S | S.Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | S.CdiASS22ORF2655P |
| 2665 | 423 aa hypothetical protein | |||
| 2670 | R | Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | CdiASS22ORF2655P |
| 2675 | 56 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2745 | recombinase family protein | |||
| 2750 | M | M2.CdiS122ORF3010P (100% identity) | CATCG | M1.CdiASS22ORF2750P |
| 2755 | M | M1.Pdi30ORF18765P (100% identity) | CATCG | M2.CdiASS22ORF2750P |
| 2760 | 383 aa hypothetical protein | |||
| 2830 | DrmE family protein | |||
| 2835 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.CdiASS22ORF2835P |
| 2840 | class B sortase | |||
| 4500 | Rrf2 family transcriptional regulator | |||
| 4505 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.CdiASS22ORF4505P |
| 4510 | patatin-like phospholipase family protein | |||
| 11075 | 65 aa hypothetical protein | |||
| 11080 | M | M.CdiS0352ORF4245P (100% identity) | GATC | M.CdiASS22ORF11080P |
| 11085 | 44 aa hypothetical protein | |||
| 14170 | 73 aa hypothetical protein | |||
| 14175 | M | M.Pdi30ORF7740P (100% identity) | M.CdiASS22ORF14175P | |
| 14180 | 58 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8135 | cell division protein | |||
| 8140 | R | Pdi30McrBP (100% identity) | CdiASS22McrBP | |
| 8145 | R | Pdi30McrCP (100% identity) | CdiASS22McrCP | |
| 8150 | sigma 54-interacting transcriptional regulator | |||