Clostridioides difficile ASS21 |
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Putative Clostridioides difficile ASS21 RM systems
Ref: Blau,K. et al. Microorganisms 11 (10), 2497 (2023)
REBASE ref # 37780
Complete sequence: 4,214,759 bp
GenBank #: CP133827
REBASE acronym: CdiASS21
Org_num: 72544
All begin RHN80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16790 | 56 aa hypothetical protein | |||
| 16795 | R | Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | CdiASS21ORF16810P |
| 16800 | 423 aa hypothetical protein | |||
| 16805 | S | S.Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | S.CdiASS21ORF16810P |
| 16810 | M | M.CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | M.CdiASS21ORF16810P |
| 16815 | 115 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5325 | 58 aa hypothetical protein | |||
| 5330 | M | M.Pdi30ORF7740P (100% identity) | M.CdiASS21ORF5330P | |
| 5335 | 73 aa hypothetical protein | |||
| 8405 | 44 aa hypothetical protein | |||
| 8410 | M | M.CdiS0352ORF4245P (100% identity) | GATC | M.CdiASS21ORF8410P |
| 8415 | 65 aa hypothetical protein | |||
| 14965 | patatin-like phospholipase family protein | |||
| 14970 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.CdiASS21ORF14970P |
| 14975 | Rrf2 family transcriptional regulator | |||
| 16625 | class B sortase | |||
| 16630 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.CdiASS21ORF16630P |
| 16635 | DrmE family protein | |||
| 16705 | 383 aa hypothetical protein | |||
| 16710 | M | M1.Pdi30ORF18765P (100% identity) | CATCG | M1.CdiASS21ORF16710P |
| 16715 | M | M2.CdiS122ORF3010P (100% identity) | CATCG | M2.CdiASS21ORF16710P |
| 16720 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11330 | sigma 54-interacting transcriptional regulator | |||
| 11335 | R | Pdi30McrCP (100% identity) | CdiASS21McrCP | |
| 11340 | R | Pdi30McrBP (100% identity) | CdiASS21McrBP | |
| 11345 | cell division protein | |||