Citrobacter freundii OIPH-N354 |
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Putative Citrobacter freundii OIPH-N354 RM systems
Ref: Umeda,K. et al. unpublished
REBASE ref # 37778
| Sequence length: | GenBank #: | |
| Chromosome: | 5,537,149 bp | AP028317 |
| plasmid pN354-1: | 346,983 bp | AP028318 |
| plasmid pN354-2: | 178,823 bp | AP028319 |
REBASE acronym: Cfr354
Org_num: 72535
All begin OIPHN354_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 46440 | 388 aa hypothetical protein | |||
| 46450 | R | CfrE51ORF21070P (100% identity) | Cfr354ORF46460P | |
| 46460 | M | M.Cfr330ORF45990P (100% identity) | M.Cfr354ORF46460P | |
| 46470 | S | S.Cfr56415ORF5180P (100% identity) | S.Cfr354ORF46460P | |
| 46480 | endoribonuclease SymE | |||
| 46850 | 1208 aa hypothetical protein | |||
| 46860 | M | M.CfrE51ORF21275P (100% identity) | M.Cfr354ORF46860P | |
| 46870 | S | S.Cfr56415ORF4990P (100% identity) | GRTAYNNNNNGTTY | S1.Cfr354ORF46860P |
| 46880 | 477 aa hypothetical protein | |||
| 46890 | 676 aa hypothetical protein | |||
| 46900 | R | Cfr330ORF46390P (100% identity) | Cfr354ORF46860P | |
| 46910 | S | S2.Cfr330ORF46390P (100% identity) | S2.Cfr354ORF46860P | |
| 46920 | 438 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3960 | cell division protein DamX | |||
| 3970 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr354DamP |
| 3980 | ribulose-phosphate 3-epimerase | |||
| 4960 | acrEF/envCD operon transcriptional regulator | |||
| 4970 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.Cfr354ORF4970P |
| 4980 | integrase | |||
| 12760 | 75 aa hypothetical protein | |||
| 12770 | M | M.Cfr330ORF12780P (100% identity) | M.Cfr354ORF12770P | |
| 12780 | replication endonuclease | |||
| 16430 | bacteriophage lambda NinG | |||
| 16440 | M | M.Cfr330ORF16460P (100% identity) | M.Cfr354ORF16440P | |
| 16450 | antitermination protein | |||
| 21390 | phosphohydrolase | |||
| 21400 | M | M.CfrLORF9975P (97% identity) | CCWGG | M.Cfr354ORF21400P |
| 21410 | V | V.CfrMH15ORF11700P (100% identity) | V.Cfr354ORF21400P | |
| 21420 | drug/metabolite exporter YedA | |||
| 21950 | 182 aa hypothetical protein | |||
| 21960 | M | M1.Cfr330ORF22060P (100% identity) | M1.Cfr354ORF21960P | |
| 21970 | 68 aa hypothetical protein | |||
| 21980 | 57 aa hypothetical protein | |||
| 21990 | M | M.CfrCF04ORFGP (100% identity) | M2.Cfr354ORF21960P | |
| 22000 | 879 aa hypothetical protein | |||
| 22950 | 148 aa hypothetical protein | |||
| 22960 | M | M.Cfr330ORF23050P (100% identity) | M.Cfr354ORF22960P | |
| 22970 | 72 aa hypothetical protein | |||
| 27540 | 63 aa hypothetical protein | |||
| 27550 | M | M.Cfr330ORF27630P (100% identity) | M.Cfr354ORF27550P | |
| 27560 | 187 aa hypothetical protein | |||
| 30220 | 335 aa hypothetical protein | |||
| 30230 | M | M.CfrE51ORF13210P (100% identity) | M.Cfr354ORF30230P | |
| 30240 | 93 aa hypothetical protein | |||
| 34780 | 112 aa hypothetical protein | |||
| 34790 | M | M1.Cfr330ORF34360P (100% identity) | M1.Cfr354ORF34790P | |
| 34800 | 90 aa hypothetical protein | |||
| 34810 | M | M2.Cfr330ORF34360P (100% identity) | M2.Cfr354ORF34790P | |
| 34820 | 94 aa hypothetical protein | |||
| 42790 | DUF1317 domain-containing protein | |||
| 42800 | M | M.Cfr330ORF42360P (100% identity) | M.Cfr354ORF42800P | |
| 42810 | bacteriophage protein | |||
| 46780 | 211 aa hypothetical protein | |||
| 46790 | R | CfrE51ORF21250P (100% identity) | Cfr354ORF46790P | |
| 46800 | 75 aa hypothetical protein | |||
| 49700 | 72 aa hypothetical protein | |||
| 49710 | M | M.Cfr330ORF49230P (100% identity) | M.Cfr354ORF49710P | |
| 49720 | 147 aa hypothetical protein | |||
| 51630 | portal vertex protein | |||
| 51640 | M | M.Cfr330ORF51150P (100% identity) | M.Cfr354ORF51640P | |
| 51650 | phage replication protein | |||
| 51650 | phage replication protein | |||
| ??? | M | M.Cfr330ORF51170P (100% identity) | M.Cfr354ORF51660P | |
| 51670 | 106 aa hypothetical protein | |||
| plasmid pN354-1 | ||||
| 55660 | 55 aa hypothetical protein | |||
| 55670 | M | M.Cfr330ORF55180P (100% identity) | M.Cfr354ORF55670P | |
| 55680 | nuclease | |||
| 56640 | 102 aa hypothetical protein | |||
| 56650 | M | M.SenZC055ORF24890P (100% identity) | M.Cfr354ORF56650P | |
| 56660 | 203 aa hypothetical protein | |||
| 57450 | DNA-binding protein | |||
| 57460 | M | M1.PspNIH2ORF20995P (100% identity) | M.Cfr354ORF57460P | |
| 57470 | 217 aa hypothetical protein | |||
| plasmid pN354-2 | ||||
| 57910 | 120 aa hypothetical protein | |||
| 57920 | M | M.KquSNI47ORF52720P (100% identity) | M.Cfr354ORF57920P | |
| 57930 | 149 aa hypothetical protein | |||
| 58650 | 100 aa hypothetical protein | |||
| 58660 | M | M.Cfr330ORF58150P (100% identity) | M.Cfr354ORF58660P | |
| 58670 | 99 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 32880 | 462 aa hypothetical protein | |||
| 32890 | M | M.Cfr330ORF32450P (100% identity) | GTCAGC | M.Cfr354ORF32890P |
| 32900 | R | Cfr330ORF32450P (100% identity) | GTCAGC | Cfr354ORF32890P |
| 32910 | prepilin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 46430 | 100 aa hypothetical protein | |||
| 46440 | R | Cfr330MrrP (100% identity) | Cfr354MrrP | |
| 46450 | DEAD/DEAH box helicase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 51670 | 106 aa hypothetical protein | |||
| 51680 | M | M.Cfr330ORF51190P (100% identity) | M.Cfr354ORF51680P | |
| 51690 | 70 aa hypothetical protein | |||