Citrobacter freundii OIPH-N330 |
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Putative Citrobacter freundii OIPH-N330 RM systems
Ref: Umeda,K. et al. unpublished
REBASE ref # 37778
| Sequence length: | GenBank #: | |
| Chromosome: | 5,501,913 bp | AP028314 |
| plasmid pN330-1: | 345,780 bp | AP028315 |
| plasmid pN330-2: | 178,823 bp | AP028316 |
REBASE acronym: Cfr330
Org_num: 72534
All begin OIPHN330_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 45970 | 388 aa hypothetical protein | |||
| 45980 | R | CfrE51ORF21070P (100% identity) | Cfr330ORF45990P | |
| 45990 | M | M.Cfr354ORF46460P (100% identity) | M.Cfr330ORF45990P | |
| 46000 | S | S.Cfr56415ORF5180P (100% identity) | S.Cfr330ORF45990P | |
| 46010 | endoribonuclease SymE | |||
| 46380 | 1208 aa hypothetical protein | |||
| 46390 | M | M.CfrE51ORF21275P (100% identity) | M.Cfr330ORF46390P | |
| 46400 | S | S.Cfr56415ORF4990P (100% identity) | GRTAYNNNNNGTTY | S1.Cfr330ORF46390P |
| 46410 | 477 aa hypothetical protein | |||
| 46420 | 676 aa hypothetical protein | |||
| 46430 | R | Cfr354ORF46860P (100% identity) | Cfr330ORF46390P | |
| 46440 | S | S2.Cfr354ORF46860P (100% identity) | S2.Cfr330ORF46390P | |
| 46450 | 438 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3960 | cell division protein DamX | |||
| 3970 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr330DamP |
| 3980 | ribulose-phosphate 3-epimerase | |||
| 4970 | acrEF/envCD operon transcriptional regulator | |||
| 4980 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.Cfr330ORF4980P |
| 4990 | integrase | |||
| 12770 | 75 aa hypothetical protein | |||
| 12780 | M | M.Cfr354ORF12770P (100% identity) | M.Cfr330ORF12780P | |
| 12790 | replication endonuclease | |||
| 16450 | bacteriophage lambda NinG | |||
| 16460 | M | M.Cfr354ORF16440P (100% identity) | M.Cfr330ORF16460P | |
| 16470 | antitermination protein | |||
| 21490 | phosphohydrolase | |||
| 21500 | M | M.CfrLORF9975P (97% identity) | CCWGG | M.Cfr330ORF21500P |
| 21510 | V | V.CfrMH15ORF11700P (100% identity) | V.Cfr330ORF21500P | |
| 21520 | drug/metabolite exporter YedA | |||
| 22050 | 182 aa hypothetical protein | |||
| 22060 | M | M1.Cfr354ORF21960P (100% identity) | M1.Cfr330ORF22060P | |
| 22070 | 68 aa hypothetical protein | |||
| 22080 | 57 aa hypothetical protein | |||
| 22090 | M | M.CfrCF04ORFGP (100% identity) | M2.Cfr330ORF22060P | |
| 22100 | 879 aa hypothetical protein | |||
| 23040 | 148 aa hypothetical protein | |||
| 23050 | M | M.Cfr354ORF22960P (100% identity) | M.Cfr330ORF23050P | |
| 23060 | 72 aa hypothetical protein | |||
| 27620 | 63 aa hypothetical protein | |||
| 27630 | M | M.Cfr354ORF27550P (100% identity) | M.Cfr330ORF27630P | |
| 27640 | 187 aa hypothetical protein | |||
| 29750 | 335 aa hypothetical protein | |||
| 29760 | M | M.CfrE51ORF13210P (100% identity) | M.Cfr330ORF29760P | |
| 29770 | 93 aa hypothetical protein | |||
| 34350 | 112 aa hypothetical protein | |||
| 34360 | M | M1.Cfr354ORF34790P (100% identity) | M1.Cfr330ORF34360P | |
| 34370 | 90 aa hypothetical protein | |||
| 34380 | M | M2.Cfr354ORF34790P (100% identity) | M2.Cfr330ORF34360P | |
| 34390 | 94 aa hypothetical protein | |||
| 42350 | DUF1317 domain-containing protein | |||
| 42360 | M | M.Cfr354ORF42800P (100% identity) | M.Cfr330ORF42360P | |
| 42370 | bacteriophage protein | |||
| 46310 | 211 aa hypothetical protein | |||
| 46320 | R | CfrE51ORF21250P (100% identity) | Cfr330ORF46320P | |
| 46330 | 75 aa hypothetical protein | |||
| 49220 | 72 aa hypothetical protein | |||
| 49230 | M | M.Cfr354ORF49710P (100% identity) | M.Cfr330ORF49230P | |
| 49240 | 147 aa hypothetical protein | |||
| 51140 | portal vertex protein | |||
| 51150 | M | M.Cfr354ORF51640P (100% identity) | M.Cfr330ORF51150P | |
| 51160 | phage replication protein | |||
| 51160 | phage replication protein | |||
| ??? | M | M.Cfr354ORF51660P (100% identity) | M.Cfr330ORF51170P | |
| 51180 | 106 aa hypothetical protein | |||
| plasmid pN330-1 | ||||
| 55170 | 55 aa hypothetical protein | |||
| 55180 | M | M.Cfr354ORF55670P (100% identity) | M.Cfr330ORF55180P | |
| 55190 | nuclease | |||
| 56140 | 102 aa hypothetical protein | |||
| 56150 | M | M.SenZC055ORF24890P (100% identity) | M.Cfr330ORF56150P | |
| 56160 | 203 aa hypothetical protein | |||
| 56940 | DNA-binding protein | |||
| 56950 | M | M1.PspNIH2ORF20995P (100% identity) | M.Cfr330ORF56950P | |
| 56960 | 217 aa hypothetical protein | |||
| plasmid pN330-2 | ||||
| 57400 | 120 aa hypothetical protein | |||
| 57410 | M | M.KquSNI47ORF52720P (100% identity) | M.Cfr330ORF57410P | |
| 57420 | 149 aa hypothetical protein | |||
| 58140 | 100 aa hypothetical protein | |||
| 58150 | M | M.Cfr354ORF58660P (100% identity) | M.Cfr330ORF58150P | |
| 58160 | 99 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 32440 | 462 aa hypothetical protein | |||
| 32450 | M | M.Cfr354ORF32890P (100% identity) | GTCAGC | M.Cfr330ORF32450P |
| 32460 | R | Cfr354ORF32890P (100% identity) | GTCAGC | Cfr330ORF32450P |
| 32470 | prepilin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 45960 | 100 aa hypothetical protein | |||
| 45970 | R | Cfr354MrrP (100% identity) | Cfr330MrrP | |
| 45980 | DEAD/DEAH box helicase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 51180 | 106 aa hypothetical protein | |||
| 51190 | M | M.Cfr354ORF51680P (100% identity) | M.Cfr330ORF51190P | |
| 51200 | 70 aa hypothetical protein | |||