Pseudomonas aeruginosa HPA1406 |
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Putative Pseudomonas aeruginosa HPA1406 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 7,054,120 bp
GenBank #: CP137491
REBASE acronym: Pae406
Org_num: 72866
All begin R5018_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16015 | helix-turn-helix transcriptional regulator | |||
| 16020 | R | PaeLo565ORF25365P (100% identity) | GATNNNNNNNRTGGC | Pae406ORF16030P |
| 16025 | S | S.PaeNDM1ORF495P (100% identity) | GATNNNNNNNRTGGC | S.Pae406ORF16030P |
| 16030 | M | M.PaeLo565ORF25365P (100% identity) | GATNNNNNNNRTGGC | M.Pae406ORF16030P |
| 16035 | mCpol domain-containing protein | |||
| 24620 | IS3-like element IS222 family transposase | |||
| 24625 | R | PdePDENORFFP (100% identity) | CCCNNNNNGTAG | Pae406ORF24645P |
| 24630 | S | S.PdePDENORFFP (100% identity) | CCCNNNNNGTAG | S.Pae406ORF24645P |
| 24635 | ATP-dependent helicase | |||
| 24640 | AAA family ATPase | |||
| 24645 | M | M2.PdePDENORFFP (99% identity) | CCCNNNNNGTAG | M2.Pae406ORF24645P |
| 24650 | M | M1.PaeWS394ORF2447P (100% identity) | CCCNNNNNGTAG | M1.Pae406ORF24645P |
| 24655 | DNA-processing protein DprA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6600 | 58 aa hypothetical protein | |||
| 6605 | M | M.PaeZPPH33ORF28460P (100% identity) | M.Pae406ORF6605P | |
| 6610 | 83 aa hypothetical protein | |||
| 6925 | DUF1566 domain-containing protein | |||
| 6930 | M | M.Pae875ORF3595P (100% identity) | M.Pae406ORF6930P | |
| 6935 | phosphohydrolase | |||
| 25305 | DUF5677 domain-containing protein | |||
| 25310 | M | M.PaesPA3ORF11530P (100% identity) | M.Pae406ORF25310P | |
| 25315 | 164 aa hypothetical protein | |||
| 31020 | 88 aa hypothetical protein | |||
| 31025 | M | M.PaeLo565ORF6155P (100% identity) | M.Pae406ORF31025P | |
| 31030 | 86 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12795 | DUF262 domain-containing protein | |||
| 12800 | M | M.PspP16ORFGP (100% identity) | M.Pae406ORF12800P | |
| 12805 | R | PaeY82ORF4704P (100% identity) | Pae406ORF12800P | |
| 12810 | ATP-dependent endonuclease | |||