Pseudomonas aeruginosa 2020CK-00196 |
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Putative Pseudomonas aeruginosa 2020CK-00196 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
Complete sequence: 7,216,002 bp
GenBank #: CP136983
REBASE acronym: Pae196
Org_num: 72836
All begin L4668_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 410 | site-specific integrase | |||
| 415 | M | M.PaePA7II (100% identity) | AGANNNNNNNNTCAA | M.Pae196ORF415P |
| 420 | S | S.PaePA7II (100% identity) | AGANNNNNNNNTCAA | S.Pae196ORF415P |
| 425 | R | PaePA7IIP (100% identity) | AGANNNNNNNNTCAA | Pae196ORF415P |
| 430 | C | C.PspBYT5ORF19420P (100% identity) | C.Pae196ORF415P | |
| 435 | 196 aa hypothetical protein | |||
| 1835 | sigma 54-interacting transcriptional regulator | |||
| 1840 | R | PaeMF1ORF1540P (99% identity) | Pae196ORF1850P | |
| 1845 | DNA recombination protein RmuC | |||
| 1850 | M | M.Pfl13852ORFAP (100% identity) | M.Pae196ORF1850P | |
| 1855 | S | S.Pfl13852ORFAP (100% identity) | S.Pae196ORF1850P | |
| 1860 | 48 aa hypothetical protein | |||
| 12355 | DNA-processing protein DprA | |||
| 12360 | M | M1.Pae973ORF12590P (100% identity) | M1.Pae196ORF12360P | |
| 12365 | M | M2.Pae973ORF12590P (100% identity) | M2.Pae196ORF12360P | |
| 12370 | S | S.Pae973ORF12590P (100% identity) | S.Pae196ORF12360P | |
| 12375 | R | Pae973ORF12590P (100% identity) | Pae196ORF12360P | |
| 12380 | AAA family ATPase | |||
| 23345 | IS3 family transposase | |||
| 23350 | R | PaeMF1ORF24740P (100% identity) | Pae196ORF23370P | |
| 23355 | 235 aa hypothetical protein | |||
| 23360 | AAA family ATPase | |||
| 23365 | S | S.PaeMF1ORF24740P (100% identity) | S.Pae196ORF23370P | |
| 23370 | M | M.PaeMF1ORF24740P (100% identity) | M.Pae196ORF23370P | |
| 23375 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1640 | 94 aa hypothetical protein | |||
| 1645 | M | M.PaesS1ORF1335P (100% identity) | M.Pae196ORF1645P | |
| 1650 | V | V.PaesS1ORF1335P (100% identity) | V.Pae196ORF1645P | |
| 1655 | DISARM system phospholipase D-like protein DrmC | |||
| 1665 | DISARM system helicase DrmA | |||
| 1670 | RM | PaesS1ORF1360P (100% identity) | Pae196ORF1670P | |
| 1675 | DISARM system SNF2-like helicase DrmD | |||
| 11755 | 213 aa hypothetical protein | |||
| 11760 | M | M.PaeYTSY4ORF6725P (100% identity) | M.Pae196ORF11760P | |
| 11765 | 159 aa hypothetical protein | |||
| 22120 | nucleoid-associated protein YejK | |||
| 22125 | M | M.PspHORFAP (100% identity) | M.Pae196ORF22125P | |
| 22130 | Arc family DNA-binding protein | |||
| 25525 | nucleoid-associated protein YejK | |||
| 25530 | M | M.PspAK6UORFCP (100% identity) | M.Pae196ORF25530P | |
| 25535 | Arc family DNA-binding protein | |||
| 29445 | 83 aa hypothetical protein | |||
| 29450 | M | M.PaeTBCFORFBP (89% identity) | M.Pae196ORF29450P | |
| 29455 | phosphoadenosine phosphosulfate reductase family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12375 | HsdR family type I site-specific | |||
| 12380 | R | Pae973McrBP (100% identity) | Pae196McrBP | |
| 12385 | R | Pae973McrCP (100% identity) | Pae196McrCP | |
| 12390 | 166 aa hypothetical protein | |||