Citrobacter freundii F4321 |
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Putative Citrobacter freundii F4321 RM systems
Ref: Li,X. unpublished
REBASE ref # 22399
| Sequence length: | GenBank #: | |
| Chromosome: | 5,008,854 bp | CP137179 |
| plasmid pF4321-2: | 84,695 bp | CP137181 |
| plasmid pF4321-KPC: | 161,177 bp | CP137180 |
REBASE acronym: CfrF4321
Org_num: 72533
All begin R4T13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10445 | 136 aa hypothetical protein | |||
| 10450 | R | CfrS1ORF21920P (100% identity) | CfrF4321ORF10455P | |
| 10455 | M | M.CfrZS47ORF21595P (100% identity) | M.CfrF4321ORF10455P | |
| 10460 | S | S.CfrZS47ORF21595P (100% identity) | S.CfrF4321ORF10455P | |
| 10465 | thymidylate synthase | |||
| 14380 | 191 aa hypothetical protein | |||
| 14385 | R | Csp1013ORF365P (100% identity) | CfrF4321ORF14390P | |
| 14390 | M | M.Csp1013ORF365P (100% identity) | M.CfrF4321ORF14390P | |
| 14395 | S | S.EcoE6ORF20695P (96% identity) | S.CfrF4321ORF14390P | |
| 14400 | 228 aa hypothetical protein | |||
| 18155 | 102 aa hypothetical protein | |||
| 18160 | R | CspCF971ORF5910P (100% identity) | CfrF4321ORF18180P | |
| 18165 | S | S.Eho916ORF18625P (52% identity) | S3.CfrF4321ORF18180P | |
| ??? | S | S.EcoS1632ORFHP (25% identity) | S2.CfrF4321ORF18180P | |
| 18175 | S | S.Eho916ORF18625P (44% identity) | S1.CfrF4321ORF18180P | |
| 18180 | M | M.CspCF971ORF5910P (100% identity) | M.CfrF4321ORF18180P | |
| 18185 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 915 | integrase | |||
| 920 | M | M.Cfr550ORF3815P (100% identity) | M.CfrF4321ORF920P | |
| 925 | R | Cfr550ORF3810P (100% identity) | CfrF4321ORF920P | |
| 930 | recombinase family protein | |||
| 5755 | 70 aa hypothetical protein | |||
| 5760 | M | M.CfrZS47ORF16765P (100% identity) | M.CfrF4321ORF5760P | |
| 5765 | DUF3850 domain-containing protein | |||
| 10350 | endoribonuclease SymE | |||
| 10355 | R | Cfri0ORF4248P (98% identity) | CfrF4321ORF10355P | |
| 10360 | helix-turn-helix transcriptional regulator | |||
| 15965 | cell division protein DamX | |||
| 15970 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrF4321DamP |
| 15975 | ribulose-phosphate 3-epimerase | |||
| 16510 | DUF2556 family protein | |||
| 16515 | M | M.CfrZS47ORF2675P (100% identity) | ATGCAT | M.CfrF4321ORF16515P |
| 16520 | DNA-binding transcriptional regulator Fis | |||
| 17560 | DUF3850 domain-containing protein | |||
| 17565 | M | M.Cfr67ORF19490P (100% identity) | M.CfrF4321ORF17565P | |
| 17570 | 70 aa hypothetical protein | |||
| 21450 | recombination protein NinG | |||
| 21455 | M | M.Csp944ORF7665P (99% identity) | M.CfrF4321ORF21455P | |
| 21460 | antiterminator Q family protein | |||
| 23590 | phosphohydrolase | |||
| 23595 | M | M.CfrZS47ORF10210P (100% identity) | CCWGG | M.CfrF4321ORF23595P |
| 23600 | V | V.CfrZS47ORF10210P (100% identity) | V.CfrF4321ORF23595P | |
| 23605 | drug/metabolite exporter YedA | |||
| 24140 | 340 aa hypothetical protein | |||
| 24145 | M | M.CcrS1751ORFIP (96% identity) | M.CfrF4321ORF24145P | |
| 24150 | DNA cytosine methyltransferase | |||
| 24145 | phage N-6-adenine-methyltransferase | |||
| 24150 | M | M2.Sens24230ORF8785P (99% identity) | M.CfrF4321ORF24150P | |
| 24155 | RusA family crossover junction | |||
| 24185 | TrmB family transcriptional regulator | |||
| 24190 | M | M.Cfr502ORF8225P (99% identity) | M.CfrF4321ORF24190P | |
| 24195 | phage holin | |||
| plasmid pF4321-2 | ||||
| 25375 | SOS response-associated peptidase family | |||
| 25380 | M | M.Sen86ORF23100P (100% identity) | M.CfrF4321ORF25380P | |
| 25385 | 73 aa hypothetical protein | |||
| plasmid pF4321-KPC | ||||
| 25095 | 73 aa hypothetical protein | |||
| 25100 | M | M.KpnP72ORF28970P (100% identity) | M.CfrF4321ORF25100P | |
| 25105 | 66 aa hypothetical protein | |||