Citrobacter freundii F3419 |
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Putative Citrobacter freundii F3419 RM systems
Ref: Li,X. unpublished
REBASE ref # 22399
Complete sequence: 5,321,875 bp
GenBank #: CP137133
REBASE acronym: CfrF3419
Org_num: 72531
All begin R2X30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9055 | 119 aa hypothetical protein | |||
| 9060 | M | M.CfrS1ORF5500P (100% identity) | AAGANNNNNCTC | M.CfrF3419ORF9060P |
| 9065 | S | S.Eco29C15ORF5625P (100% identity) | AAGANNNNNCTC | S.CfrF3419ORF9060P |
| 9070 | R | CfrS1ORF5500P (100% identity) | AAGANNNNNCTC | CfrF3419ORF9060P |
| 9075 | IS1 family transposase | |||
| 19045 | thymidylate synthase | |||
| 19050 | S | S.CfrZS47ORF21595P (100% identity) | S.CfrF3419ORF19055P | |
| 19055 | M | M.CfrZS47ORF21595P (100% identity) | M.CfrF3419ORF19055P | |
| 19060 | R | CfrS1ORF21920P (100% identity) | CfrF3419ORF19055P | |
| 19065 | 136 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2525 | 94 aa hypothetical protein | |||
| 2530 | M | M.CfrZS47ORF14380P (100% identity) | M.CfrF3419ORF2530P | |
| 2535 | 72 aa hypothetical protein | |||
| 4440 | drug/metabolite exporter YedA | |||
| 4445 | V | V.CfrS1ORF10095P (100% identity) | V.CfrF3419ORF4450P | |
| 4450 | M | M.CfrZS47ORF10210P (100% identity) | CCWGG | M.CfrF3419ORF4450P |
| 4455 | phosphohydrolase | |||
| 6400 | 3-5 exonuclease | |||
| 6405 | M | M2.CfrS1ORF8125P (100% identity) | M.CfrF3419ORF6405P | |
| 6410 | 65 aa hypothetical protein | |||
| 6420 | 57 aa hypothetical protein | |||
| 6425 | M | M1.CfrS1ORF8125P (100% identity) | M.CfrF3419ORF6425P | |
| 6430 | replication endonuclease | |||
| 6430 | replication endonuclease | |||
| 6435 | M | M.CfrZS47ORF8260P (100% identity) | M.CfrF3419ORF6435P | |
| 6440 | type II toxin-antitoxin system death-on-curing | |||
| 6875 | 72 aa hypothetical protein | |||
| 6880 | M | M.CfrZS47ORF7815P (100% identity) | M.CfrF3419ORF6880P | |
| 6885 | 147 aa hypothetical protein | |||
| 11825 | DNA-binding transcriptional regulator Fis | |||
| 11830 | M | M.CfrZS47ORF2675P (100% identity) | ATGCAT | M.CfrF3419ORF11830P |
| 11835 | DUF2556 family protein | |||
| 12370 | ribulose-phosphate 3-epimerase | |||
| 12375 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrF3419DamP |
| 12380 | cell division protein DamX | |||
| 14055 | BREX-1 system phosphatase PglZ type A | |||
| 14060 | RM | KspBL02ORF42510BP (100% identity) | RM1.CfrF3419ORF14060P | |
| 14065 | reverse transcriptase domain-containing protein | |||
| 14070 | 179 aa hypothetical protein | |||
| 14075 | RM | KspBL05ORF41950AP (100% identity) | AGGAAG | RM2.CfrF3419ORF14060P |
| 14080 | DUF262 domain-containing protein | |||
| 15610 | replication endonuclease | |||
| 15615 | M | M.CfrS1ORF25340P (100% identity) | M.CfrF3419ORF15615P | |
| 15620 | ImmA/IrrE family metallo-endopeptidase | |||
| 16655 | 340 aa hypothetical protein | |||
| 16660 | M | M.CfrZS47ORF23465P (100% identity) | M.CfrF3419ORF16660P | |
| 16665 | RusA family crossover junction | |||
| 17720 | SOS response-associated peptidase family | |||
| 17725 | M | M.Eco35152ORF23995P (100% identity) | M.CfrF3419ORF17725P | |
| 17730 | 73 aa hypothetical protein | |||
| 19150 | helix-turn-helix transcriptional regulator | |||
| 19155 | R | Cfri0ORF4248P (98% identity) | CfrF3419ORF19155P | |
| 19160 | endoribonuclease SymE | |||
| 22255 | type II toxin-antitoxin system death-on-curing | |||
| 22260 | M | M.CfrZS47ORF8260P (100% identity) | M.CfrF3419ORF22260P | |
| 22265 | replication endonuclease | |||
| 22280 | 71 aa hypothetical protein | |||
| 22285 | M | M.CfrS1ORF18680P (100% identity) | M.CfrF3419ORF22285P | |
| 22290 | 3-5 exonuclease | |||
| 24215 | DUF3850 domain-containing protein | |||
| 24220 | M | M.CfrZS47ORF16765P (100% identity) | M.CfrF3419ORF24220P | |
| 24225 | 70 aa hypothetical protein | |||
| 24715 | 100 aa hypothetical protein | |||
| 24720 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.CfrF3419ORF24720P |
| 24725 | 143 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15590 | 82 aa hypothetical protein | |||
| 15595 | M | M.CfrS1ORF25360P (100% identity) | M.CfrF3419ORF15595P | |
| 15600 | DUF4406 domain-containing protein | |||