Vibrio paracholerae SIO |
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Putative Vibrio paracholerae SIO RM systems
Ref: Otto,S.B. et al. unpublished
REBASE ref # 37850
| Sequence length: | GenBank #: | |
| chromosome 2: | 2,689,271 bp | CP137089 |
| plasmid unnamed: | 278,143 bp | CP137090 |
REBASE acronym: VpaSIO
Org_num: 72964
All begin R4537_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 5710 | WYL domain-containing protein | |||
| 5715 | M | M.VchSIOORF530P (78% identity) | M.VpaSIOORF5715P | |
| 5720 | nucleotidyltransferase | |||
| 5725 | SLATT domain-containing protein | |||
| 5730 | R | VchSIOORF530P (100% identity) | VpaSIOORF5715P | |
| 5735 | SprT family zinc-dependent metalloprotease | |||
| 9940 | DUF6602 domain-containing protein | |||
| 9945 | R | VchSIOORF4630P (100% identity) | VpaSIOORF9955P | |
| 9950 | S | S.VchSIOORF4630P (100% identity) | S.VpaSIOORF9955P | |
| 9955 | M | M.VchSIOORF4630P (100% identity) | M.VpaSIOORF9955P | |
| 9960 | GIY-YIG nuclease family protein | |||
| 9965 | DEAD/DEAH box helicase family protein | |||
| 9970 | 181 aa hypothetical protein | |||
| 9975 | C | C.VchPORF10725P (100% identity) | C.VpaSIOORF9955P | |
| 9980 | TniB family NTP-binding protein | |||
| plasmid unnamed | ||||
| 17930 | 265 aa hypothetical protein | |||
| 17935 | S | S.VchSIOORF1160P (100% identity) | S.VpaSIOORF17940P | |
| 17940 | M | M.Vch702ORFDP (99% identity) | M.VpaSIOORF17940P | |
| 17945 | R | VchSIOORF1160P (100% identity) | VpaSIOORF17940P | |
| 17950 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 6820 | AAA family ATPase | |||
| 6825 | M | M.Vsp1110DamP (98% identity) | GATC | M.VpaSIODamP |
| 6830 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 15070 | class I SAM-dependent methyltransferase | |||
| 15075 | R | Vch1141ORF10075P (99% identity) | VpaSIOORF15075P | |
| 15080 | nuclease-related domain-containing protein | |||