Citrobacter freundii F3221 |
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Putative Citrobacter freundii F3221 RM systems
Ref: Li,X. unpublished
REBASE ref # 22399
| Sequence length: | GenBank #: | |
| Chromosome: | 5,135,854 bp | CP137201 |
| plasmid pF3221-2: | 113,821 bp | CP137200 |
| plasmid pF3221-NDM: | 333,190 bp | CP137202 |
REBASE acronym: CfrF3221
Org_num: 72529
All begin R5Q27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11235 | IS5-like element IS5 family transposase | |||
| 11240 | M | M.Cfr880ORF23190P (100% identity) | GATGNNNNNGTT | M.CfrF3221ORF11240P |
| 11245 | S | S.KpnKLZTORF27160P (100% identity) | GATGNNNNNGTT | S.CfrF3221ORF11240P |
| 11250 | YecA family protein | |||
| 11255 | R | Cfr116IP (100% identity) | GATGNNNNNGTT | CfrF3221ORF11240P |
| 11260 | SprT family zinc-dependent metalloprotease | |||
| 22605 | toll/interleukin-1 receptor domain-containing | |||
| 22610 | R | EcohubtORF20055P (99% identity) | CfrF3221ORF22615P | |
| 22615 | M | M.Kae1481ORFBP (98% identity) | M.CfrF3221ORF22615P | |
| 22620 | S | S.Csp1013ORF365P (58% identity) | S.CfrF3221ORF22615P | |
| 22625 | 228 aa hypothetical protein | |||
| 22640 | 68 aa hypothetical protein | |||
| 22645 | M | M1.Cfr1443ORF23395P (97% identity) | M.CfrF3221ORF22645P | |
| 22650 | S | S2.Cfr1443ORF23395P (55% identity) | S1.CfrF3221ORF22645P | |
| 22655 | S | S2.Cfr1443ORF23395P (39% identity) | S2.CfrF3221ORF22645P | |
| 22660 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2970 | cell division protein DamX | |||
| 2975 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrF3221DamP |
| 2980 | ribulose-phosphate 3-epimerase | |||
| 3515 | DUF2556 family protein | |||
| 3520 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.CfrF3221ORF3520P |
| 3525 | DNA-binding transcriptional regulator Fis | |||
| 7295 | GTPase family protein | |||
| 7300 | RM | Cfr393ORFFP (99% identity) | CfrF3221ORF7300P | |
| 7305 | DEAD/DEAH box helicase | |||
| 11550 | 180 aa hypothetical protein | |||
| 11555 | M | M.Csp944ORF10665P (100% identity) | M.CfrF3221ORF11555P | |
| 11560 | 114 aa hypothetical protein | |||
| 11615 | 340 aa hypothetical protein | |||
| 11620 | M | M.Cfr151ORF3160P (99% identity) | M.CfrF3221ORF11620P | |
| 11625 | RusA family crossover junction | |||
| 11650 | TrmB family transcriptional regulator | |||
| 11655 | M | M.Cfr267ORF5595P (99% identity) | M.CfrF3221ORF11655P | |
| 11660 | phage holin family protein | |||
| 22500 | HNH endonuclease | |||
| 22505 | R | Cfri8ORF4314P (98% identity) | CfrF3221ORF22505P | |
| 22510 | helix-turn-helix domain-containing protein | |||
| plasmid pF3221-2 | ||||
| 1025 | 76 aa hypothetical protein | |||
| 1030 | M | M.EspDR25ORFMP (100% identity) | M.CfrF3221ORF1030P | |
| 1035 | 280 aa hypothetical protein | |||
| plasmid pF3221-NDM | ||||
| 26800 | 277 aa hypothetical protein | |||
| 26805 | M | M.Ssp15303ORFEP (100% identity) | GATC | M.CfrF3221ORF26805P |
| 26810 | DNA-binding protein | |||
| 26940 | 202 aa hypothetical protein | |||
| 26945 | M | M.Ssp15303ORFDP (100% identity) | M.CfrF3221ORF26945P | |
| 26950 | 106 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4540 | inovirus Gp2 family protein | |||
| 4545 | M | M.Eco9067ORF712P (100% identity) | M.CfrF3221ORF4545P | |
| 4550 | IS3 family transposase | |||