Escherichia coli isolate F437 |
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Putative Escherichia coli isolate F437 RM systems
Ref: Leclercq,S. unpublished
REBASE ref # 37790
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,849,261 bp | OY754398 |
| plasmid pF437-2: | 63,964 bp | OY754400 |
REBASE acronym: EcoF437
Org_num: 72683
All begin FGAF437_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 38130 | adenine/cytosine-specific restriction | |||
| 38140 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | EcoF437ORF38150P |
| 38150 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.EcoF437ORF38150P |
| 38160 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.EcoF437ORF38150P |
| 38170 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3470 | cell division protein DamX | |||
| 3480 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF437DamP |
| 3490 | ribulose-phosphate 3-epimerase | |||
| 4540 | DUF2556 family protein | |||
| 4550 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoF437ORF4550P |
| 4560 | DNA-binding transcriptional regulator Fis | |||
| 14990 | 67 aa hypothetical protein | |||
| 15000 | M | M.SflSTLE1ORF5465P (100% identity) | M.EcoF437ORF15000P | |
| 15010 | phage holin, lambda family | |||
| 28650 | replication endonuclease | |||
| 28660 | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.EcoF437ORF28660P |
| 28670 | TraR/DksA family transcriptional regulator | |||
| plasmid pF437-2 | ||||
| 46710 | conserved protein of unknown function | |||
| 46720 | M | M.Eho4ORF23420P (100% identity) | M.EcoF437ORF46720P | |
| 46730 | conserved protein of unknown function | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 38120 | GTPase | |||
| 38130 | R | Ssp28760MrrP (100% identity) | EcoF437MrrP | |
| 38140 | type I restriction-modification system | |||
| 38170 | endoribonuclease SymE | |||
| 38180 | R | EcoSTEC346McrBP (100% identity) | EcoF437McrBP | |
| 38190 | R | Ssp28760McrCP (100% identity) | EcoF437McrCP | |