Pseudomonas aeruginosa 2020CK-00442 |
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Putative Pseudomonas aeruginosa 2020CK-00442 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
Complete sequence: 6,966,844 bp
GenBank #: CP136757
REBASE acronym: Pae0442
Org_num: 72313
All begin R1K95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8815 | helix-turn-helix domain-containing protein | |||
| 8820 | M | M.PaeMF1ORF24740P (100% identity) | M.Pae0442ORF8820P | |
| 8825 | S | S.PaeMF1ORF24740P (100% identity) | S.Pae0442ORF8820P | |
| 8830 | AAA family ATPase | |||
| 8835 | 181 aa hypothetical protein | |||
| 8840 | 50 aa hypothetical protein | |||
| 8845 | R | PaeMF1ORF24740P (100% identity) | Pae0442ORF8820P | |
| 8850 | IS3 family transposase | |||
| 20525 | 361 aa hypothetical protein | |||
| 20530 | R | Pae973ORF12590P (97% identity) | Pae0442ORF20540P | |
| 20535 | S | S.Pae973ORF12590P (100% identity) | S.Pae0442ORF20540P | |
| 20540 | M | M2.Pae973ORF12590P (97% identity) | M2.Pae0442ORF20540P | |
| 20545 | M | M1.Pae973ORF12590P (97% identity) | M1.Pae0442ORF20540P | |
| 20550 | DNA-processing protein DprA | |||
| 30950 | 48 aa hypothetical protein | |||
| 30955 | S | S.Pfl13852ORFAP (100% identity) | S.Pae0442ORF30960P | |
| 30960 | M | M.Pfl13852ORFAP (100% identity) | M.Pae0442ORF30960P | |
| 30965 | DNA recombination protein RmuC | |||
| 30970 | R | PaeMF1ORF1540P (99% identity) | Pae0442ORF30960P | |
| 30975 | sigma 54-interacting transcriptional regulator | |||
| 32680 | 195 aa hypothetical protein | |||
| 32685 | C | C.PspBYT5ORF19420P (98% identity) | C.Pae0442ORF32715P | |
| 32690 | R | PaePA7IIP (98% identity) | Pae0442ORF32715P | |
| 32695 | IS3 family transposase | |||
| 32700 | S | S2.Pae0444ORF32980P (100% identity) | S2.Pae0442ORF32715P | |
| 32705 | IS30-like element IS1394 family transposase | |||
| 32710 | S | S1.Pae1786ORF445P (100% identity) | S1.Pae0442ORF32715P | |
| 32715 | M | M.PaePA7II (100% identity) | M.Pae0442ORF32715P | |
| 32720 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2700 | phosphoadenosine phosphosulfate reductase family | |||
| 2705 | M | M.PaeTBCFORFBP (89% identity) | M.Pae0442ORF2705P | |
| 2710 | 83 aa hypothetical protein | |||
| 6640 | Arc family DNA-binding protein | |||
| 6645 | M | M.PaeZM03ORFEP (100% identity) | M.Pae0442ORF6645P | |
| 6650 | nucleoid-associated protein YejK | |||
| 21165 | 159 aa hypothetical protein | |||
| 21170 | M | M.PaeYTSY4ORF6725P (100% identity) | M.Pae0442ORF21170P | |
| 21175 | 213 aa hypothetical protein | |||
| 31430 | DISARM system SNF2-like helicase DrmD | |||
| 31435 | RM | PaesS1ORF1360P (100% identity) | Pae0442ORF31435P | |
| 31440 | DISARM system helicase DrmA | |||
| 31450 | DISARM system phospholipase D-like protein DrmC | |||
| 31455 | V | V.PaesS1ORF1335P (100% identity) | V.Pae0442ORF31460P | |
| 31460 | M | M.PaesS1ORF1335P (100% identity) | M.Pae0442ORF31460P | |
| 31465 | 94 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20505 | 166 aa hypothetical protein | |||
| 20510 | R | Pae973McrCP (100% identity) | Pae0442McrCP | |
| ??? | R | Pae96McrBP (100% identity) | Pae0442McrBP | |
| 20525 | 361 aa hypothetical protein | |||